Protein–RNA interactions for Protein: Q6PDJ1

Cachd1, VWFA and cache domain-containing protein 1, mousemouse

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cachd1Q6PDJ1 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cachd1Q6PDJ1 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cachd1Q6PDJ1 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cachd1Q6PDJ1 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cachd1Q6PDJ1 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cachd1Q6PDJ1 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cachd1Q6PDJ1 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cachd1Q6PDJ1 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cachd1Q6PDJ1 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cachd1Q6PDJ1 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cachd1Q6PDJ1 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.53■□□□□ 0.56
Cachd1Q6PDJ1 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cachd1Q6PDJ1 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cachd1Q6PDJ1 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cachd1Q6PDJ1 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cachd1Q6PDJ1 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cachd1Q6PDJ1 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cachd1Q6PDJ1 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cachd1Q6PDJ1 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.52■□□□□ 0.56
Cachd1Q6PDJ1 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cachd1Q6PDJ1 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cachd1Q6PDJ1 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cachd1Q6PDJ1 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cachd1Q6PDJ1 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.52■□□□□ 0.56
Cachd1Q6PDJ1 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cachd1Q6PDJ1 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cachd1Q6PDJ1 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cachd1Q6PDJ1 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cachd1Q6PDJ1 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cachd1Q6PDJ1 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Cachd1Q6PDJ1 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cachd1Q6PDJ1 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cachd1Q6PDJ1 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cachd1Q6PDJ1 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.51■□□□□ 0.55
Cachd1Q6PDJ1 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cachd1Q6PDJ1 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cachd1Q6PDJ1 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cachd1Q6PDJ1 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cachd1Q6PDJ1 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.51■□□□□ 0.55
Cachd1Q6PDJ1 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Cachd1Q6PDJ1 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cachd1Q6PDJ1 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
Cachd1Q6PDJ1 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC18.51■□□□□ 0.55
Cachd1Q6PDJ1 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Cachd1Q6PDJ1 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cachd1Q6PDJ1 Gm28659-201ENSMUST00000188013 759 ntBASIC18.51■□□□□ 0.55
Cachd1Q6PDJ1 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cachd1Q6PDJ1 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cachd1Q6PDJ1 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cachd1Q6PDJ1 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cachd1Q6PDJ1 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Cachd1Q6PDJ1 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cachd1Q6PDJ1 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Cachd1Q6PDJ1 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cachd1Q6PDJ1 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Cachd1Q6PDJ1 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.5■□□□□ 0.55
Cachd1Q6PDJ1 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cachd1Q6PDJ1 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cachd1Q6PDJ1 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.5■□□□□ 0.55
Cachd1Q6PDJ1 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cachd1Q6PDJ1 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cachd1Q6PDJ1 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cachd1Q6PDJ1 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cachd1Q6PDJ1 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.5■□□□□ 0.55
Cachd1Q6PDJ1 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Cachd1Q6PDJ1 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cachd1Q6PDJ1 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cachd1Q6PDJ1 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cachd1Q6PDJ1 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cachd1Q6PDJ1 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Cachd1Q6PDJ1 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Cachd1Q6PDJ1 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cachd1Q6PDJ1 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cachd1Q6PDJ1 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cachd1Q6PDJ1 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Cachd1Q6PDJ1 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cachd1Q6PDJ1 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Cachd1Q6PDJ1 Gm24589-201ENSMUST00000116692 94 ntBASIC18.49■□□□□ 0.55
Cachd1Q6PDJ1 Mir5130-201ENSMUST00000175160 84 ntBASIC18.49■□□□□ 0.55
Cachd1Q6PDJ1 Gm22697-201ENSMUST00000175194 63 ntBASIC18.49■□□□□ 0.55
Cachd1Q6PDJ1 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cachd1Q6PDJ1 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.49■□□□□ 0.55
Cachd1Q6PDJ1 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC18.49■□□□□ 0.55
Cachd1Q6PDJ1 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cachd1Q6PDJ1 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.49■□□□□ 0.55
Cachd1Q6PDJ1 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cachd1Q6PDJ1 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cachd1Q6PDJ1 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cachd1Q6PDJ1 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cachd1Q6PDJ1 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cachd1Q6PDJ1 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cachd1Q6PDJ1 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cachd1Q6PDJ1 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cachd1Q6PDJ1 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cachd1Q6PDJ1 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cachd1Q6PDJ1 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cachd1Q6PDJ1 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cachd1Q6PDJ1 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cachd1Q6PDJ1 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC18.48■□□□□ 0.55
Cachd1Q6PDJ1 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 171.4 ms