Protein–RNA interactions for Protein: Q6PCM1

Kdm3a, Lysine-specific demethylase 3A, mousemouse

Predictions only

Length 1,323 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm3aQ6PCM1 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Kdm3aQ6PCM1 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC22.23■■□□□ 1.15
Kdm3aQ6PCM1 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Kdm3aQ6PCM1 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Kdm3aQ6PCM1 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Kdm3aQ6PCM1 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Kdm3aQ6PCM1 Zfp783-201ENSMUST00000095946 670 ntBASIC22.23■■□□□ 1.15
Kdm3aQ6PCM1 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Kdm3aQ6PCM1 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC22.23■■□□□ 1.15
Kdm3aQ6PCM1 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
Kdm3aQ6PCM1 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Kdm3aQ6PCM1 Gm5784-201ENSMUST00000179344 2478 ntBASIC22.22■■□□□ 1.15
Kdm3aQ6PCM1 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Kdm3aQ6PCM1 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Kdm3aQ6PCM1 Gm13158-201ENSMUST00000122007 736 ntBASIC22.22■■□□□ 1.15
Kdm3aQ6PCM1 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC22.22■■□□□ 1.15
Kdm3aQ6PCM1 AC163280.1-201ENSMUST00000228194 1100 ntBASIC22.22■■□□□ 1.15
Kdm3aQ6PCM1 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Kdm3aQ6PCM1 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Kdm3aQ6PCM1 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Kdm3aQ6PCM1 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC22.21■■□□□ 1.15
Kdm3aQ6PCM1 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Kdm3aQ6PCM1 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Kdm3aQ6PCM1 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Kdm3aQ6PCM1 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Kdm3aQ6PCM1 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Kdm3aQ6PCM1 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Kdm3aQ6PCM1 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Kdm3aQ6PCM1 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Kdm3aQ6PCM1 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Kdm3aQ6PCM1 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC22.2■■□□□ 1.14
Kdm3aQ6PCM1 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
Kdm3aQ6PCM1 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Kdm3aQ6PCM1 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
Kdm3aQ6PCM1 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Kdm3aQ6PCM1 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Kdm3aQ6PCM1 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Kdm3aQ6PCM1 Gm38285-201ENSMUST00000192928 922 ntBASIC22.2■■□□□ 1.14
Kdm3aQ6PCM1 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Kdm3aQ6PCM1 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Kdm3aQ6PCM1 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
Kdm3aQ6PCM1 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
Kdm3aQ6PCM1 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Kdm3aQ6PCM1 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Kdm3aQ6PCM1 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Kdm3aQ6PCM1 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC22.19■■□□□ 1.14
Kdm3aQ6PCM1 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC22.19■■□□□ 1.14
Kdm3aQ6PCM1 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Kdm3aQ6PCM1 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Kdm3aQ6PCM1 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC22.19■■□□□ 1.14
Kdm3aQ6PCM1 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC22.19■■□□□ 1.14
Kdm3aQ6PCM1 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC22.19■■□□□ 1.14
Kdm3aQ6PCM1 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Kdm3aQ6PCM1 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Kdm3aQ6PCM1 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Kdm3aQ6PCM1 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Kdm3aQ6PCM1 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Kdm3aQ6PCM1 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Kdm3aQ6PCM1 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Kdm3aQ6PCM1 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Kdm3aQ6PCM1 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Kdm3aQ6PCM1 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Kdm3aQ6PCM1 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Kdm3aQ6PCM1 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Kdm3aQ6PCM1 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Kdm3aQ6PCM1 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Kdm3aQ6PCM1 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Kdm3aQ6PCM1 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC22.18■■□□□ 1.14
Kdm3aQ6PCM1 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Kdm3aQ6PCM1 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Kdm3aQ6PCM1 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Kdm3aQ6PCM1 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC22.17■■□□□ 1.14
Kdm3aQ6PCM1 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Kdm3aQ6PCM1 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
Kdm3aQ6PCM1 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Kdm3aQ6PCM1 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Kdm3aQ6PCM1 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Kdm3aQ6PCM1 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Kdm3aQ6PCM1 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Kdm3aQ6PCM1 Gm10812-201ENSMUST00000099864 546 ntBASIC22.16■■□□□ 1.14
Kdm3aQ6PCM1 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
Kdm3aQ6PCM1 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Kdm3aQ6PCM1 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Kdm3aQ6PCM1 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Kdm3aQ6PCM1 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
Kdm3aQ6PCM1 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Kdm3aQ6PCM1 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC22.15■■□□□ 1.14
Kdm3aQ6PCM1 Alkbh1-212ENSMUST00000185301 408 ntBASIC22.15■■□□□ 1.14
Kdm3aQ6PCM1 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC22.15■■□□□ 1.14
Kdm3aQ6PCM1 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Kdm3aQ6PCM1 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC22.15■■□□□ 1.14
Kdm3aQ6PCM1 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Kdm3aQ6PCM1 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Kdm3aQ6PCM1 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Kdm3aQ6PCM1 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Kdm3aQ6PCM1 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Kdm3aQ6PCM1 Nrn1-203ENSMUST00000223611 1443 ntBASIC22.14■■□□□ 1.14
Kdm3aQ6PCM1 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC22.14■■□□□ 1.14
Kdm3aQ6PCM1 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Kdm3aQ6PCM1 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms