Protein–RNA interactions for Protein: Q6P8X1

Snx6, Sorting nexin-6, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx6Q6P8X1 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Snx6Q6P8X1 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Snx6Q6P8X1 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Snx6Q6P8X1 Gm13534-201ENSMUST00000121169 513 ntBASIC17.58■□□□□ 0.4
Snx6Q6P8X1 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.58■□□□□ 0.4
Snx6Q6P8X1 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Snx6Q6P8X1 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Snx6Q6P8X1 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Snx6Q6P8X1 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Snx6Q6P8X1 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Snx6Q6P8X1 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Snx6Q6P8X1 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Snx6Q6P8X1 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Snx6Q6P8X1 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Snx6Q6P8X1 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Snx6Q6P8X1 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Snx6Q6P8X1 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Snx6Q6P8X1 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Snx6Q6P8X1 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.57■□□□□ 0.4
Snx6Q6P8X1 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Snx6Q6P8X1 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.57■□□□□ 0.4
Snx6Q6P8X1 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Snx6Q6P8X1 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Snx6Q6P8X1 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Snx6Q6P8X1 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Snx6Q6P8X1 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Snx6Q6P8X1 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Snx6Q6P8X1 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Snx6Q6P8X1 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Snx6Q6P8X1 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Snx6Q6P8X1 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Snx6Q6P8X1 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Snx6Q6P8X1 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
Snx6Q6P8X1 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Snx6Q6P8X1 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Snx6Q6P8X1 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.57■□□□□ 0.4
Snx6Q6P8X1 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Snx6Q6P8X1 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Snx6Q6P8X1 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Snx6Q6P8X1 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Snx6Q6P8X1 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Snx6Q6P8X1 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Snx6Q6P8X1 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Snx6Q6P8X1 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Snx6Q6P8X1 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Snx6Q6P8X1 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.56■□□□□ 0.4
Snx6Q6P8X1 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.56■□□□□ 0.4
Snx6Q6P8X1 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.56■□□□□ 0.4
Snx6Q6P8X1 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
Snx6Q6P8X1 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.56■□□□□ 0.4
Snx6Q6P8X1 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Snx6Q6P8X1 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.56■□□□□ 0.4
Snx6Q6P8X1 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Snx6Q6P8X1 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.56■□□□□ 0.4
Snx6Q6P8X1 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.56■□□□□ 0.4
Snx6Q6P8X1 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Snx6Q6P8X1 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Snx6Q6P8X1 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.55■□□□□ 0.4
Snx6Q6P8X1 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Snx6Q6P8X1 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.55■□□□□ 0.4
Snx6Q6P8X1 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Snx6Q6P8X1 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Snx6Q6P8X1 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Snx6Q6P8X1 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Snx6Q6P8X1 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Snx6Q6P8X1 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Snx6Q6P8X1 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Snx6Q6P8X1 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Snx6Q6P8X1 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Snx6Q6P8X1 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Snx6Q6P8X1 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Snx6Q6P8X1 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Snx6Q6P8X1 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Snx6Q6P8X1 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Snx6Q6P8X1 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Snx6Q6P8X1 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Snx6Q6P8X1 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Snx6Q6P8X1 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.54■□□□□ 0.4
Snx6Q6P8X1 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
Snx6Q6P8X1 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Snx6Q6P8X1 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Snx6Q6P8X1 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Snx6Q6P8X1 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Snx6Q6P8X1 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.54■□□□□ 0.4
Snx6Q6P8X1 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Snx6Q6P8X1 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Snx6Q6P8X1 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Snx6Q6P8X1 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Snx6Q6P8X1 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.53■□□□□ 0.4
Snx6Q6P8X1 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Snx6Q6P8X1 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Snx6Q6P8X1 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Snx6Q6P8X1 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Snx6Q6P8X1 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Snx6Q6P8X1 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.52■□□□□ 0.4
Snx6Q6P8X1 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Snx6Q6P8X1 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Snx6Q6P8X1 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Snx6Q6P8X1 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Snx6Q6P8X1 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms