Protein–RNA interactions for Protein: Q6IRU2

Tpm4, Tropomyosin alpha-4 chain, mousemouse

Predictions only

Length 248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm4Q6IRU2 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tpm4Q6IRU2 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tpm4Q6IRU2 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tpm4Q6IRU2 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Tpm4Q6IRU2 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tpm4Q6IRU2 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tpm4Q6IRU2 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tpm4Q6IRU2 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Tpm4Q6IRU2 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tpm4Q6IRU2 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.56■□□□□ 0.88
Tpm4Q6IRU2 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Tpm4Q6IRU2 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tpm4Q6IRU2 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tpm4Q6IRU2 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tpm4Q6IRU2 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Tpm4Q6IRU2 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.55■□□□□ 0.88
Tpm4Q6IRU2 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tpm4Q6IRU2 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tpm4Q6IRU2 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tpm4Q6IRU2 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tpm4Q6IRU2 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tpm4Q6IRU2 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.55■□□□□ 0.88
Tpm4Q6IRU2 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tpm4Q6IRU2 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tpm4Q6IRU2 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Tpm4Q6IRU2 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Tpm4Q6IRU2 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tpm4Q6IRU2 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tpm4Q6IRU2 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tpm4Q6IRU2 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tpm4Q6IRU2 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tpm4Q6IRU2 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Tpm4Q6IRU2 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tpm4Q6IRU2 Gm43173-201ENSMUST00000202246 593 ntBASIC20.54■□□□□ 0.88
Tpm4Q6IRU2 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Tpm4Q6IRU2 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tpm4Q6IRU2 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Tpm4Q6IRU2 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Tpm4Q6IRU2 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tpm4Q6IRU2 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tpm4Q6IRU2 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Tpm4Q6IRU2 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tpm4Q6IRU2 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tpm4Q6IRU2 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tpm4Q6IRU2 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Tpm4Q6IRU2 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.53■□□□□ 0.88
Tpm4Q6IRU2 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Tpm4Q6IRU2 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tpm4Q6IRU2 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Tpm4Q6IRU2 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Tpm4Q6IRU2 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tpm4Q6IRU2 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tpm4Q6IRU2 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tpm4Q6IRU2 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Tpm4Q6IRU2 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Tpm4Q6IRU2 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tpm4Q6IRU2 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC20.52■□□□□ 0.88
Tpm4Q6IRU2 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tpm4Q6IRU2 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tpm4Q6IRU2 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.52■□□□□ 0.88
Tpm4Q6IRU2 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tpm4Q6IRU2 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tpm4Q6IRU2 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tpm4Q6IRU2 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tpm4Q6IRU2 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Tpm4Q6IRU2 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.52■□□□□ 0.87
Tpm4Q6IRU2 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tpm4Q6IRU2 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tpm4Q6IRU2 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
Tpm4Q6IRU2 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tpm4Q6IRU2 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tpm4Q6IRU2 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Tpm4Q6IRU2 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Tpm4Q6IRU2 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Tpm4Q6IRU2 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tpm4Q6IRU2 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Tpm4Q6IRU2 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tpm4Q6IRU2 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Tpm4Q6IRU2 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Tpm4Q6IRU2 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Tpm4Q6IRU2 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Tpm4Q6IRU2 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.5■□□□□ 0.87
Tpm4Q6IRU2 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tpm4Q6IRU2 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tpm4Q6IRU2 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tpm4Q6IRU2 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Tpm4Q6IRU2 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.5■□□□□ 0.87
Tpm4Q6IRU2 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tpm4Q6IRU2 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tpm4Q6IRU2 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tpm4Q6IRU2 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tpm4Q6IRU2 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tpm4Q6IRU2 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Tpm4Q6IRU2 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tpm4Q6IRU2 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.49■□□□□ 0.87
Tpm4Q6IRU2 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tpm4Q6IRU2 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tpm4Q6IRU2 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tpm4Q6IRU2 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tpm4Q6IRU2 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms