Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Col11a2Q64739 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Col11a2Q64739 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
Col11a2Q64739 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
Col11a2Q64739 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
Col11a2Q64739 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Col11a2Q64739 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC22.56■■□□□ 1.2
Col11a2Q64739 Gm37805-201ENSMUST00000192612 1094 ntBASIC22.56■■□□□ 1.2
Col11a2Q64739 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC22.56■■□□□ 1.2
Col11a2Q64739 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Col11a2Q64739 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Col11a2Q64739 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Col11a2Q64739 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
Col11a2Q64739 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Col11a2Q64739 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Col11a2Q64739 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC22.55■■□□□ 1.2
Col11a2Q64739 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Col11a2Q64739 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
Col11a2Q64739 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Col11a2Q64739 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Col11a2Q64739 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Col11a2Q64739 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Col11a2Q64739 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
Col11a2Q64739 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
Col11a2Q64739 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Col11a2Q64739 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Col11a2Q64739 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Col11a2Q64739 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Col11a2Q64739 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Col11a2Q64739 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC22.54■■□□□ 1.2
Col11a2Q64739 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Col11a2Q64739 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Col11a2Q64739 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Col11a2Q64739 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
Col11a2Q64739 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC22.53■■□□□ 1.2
Col11a2Q64739 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Col11a2Q64739 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
Col11a2Q64739 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Col11a2Q64739 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC22.53■■□□□ 1.2
Col11a2Q64739 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Col11a2Q64739 Gm7284-201ENSMUST00000131667 944 ntBASIC22.53■■□□□ 1.2
Col11a2Q64739 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Col11a2Q64739 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC22.53■■□□□ 1.2
Col11a2Q64739 Gm18101-201ENSMUST00000215769 548 ntBASIC22.53■■□□□ 1.2
Col11a2Q64739 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Col11a2Q64739 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Col11a2Q64739 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
Col11a2Q64739 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Col11a2Q64739 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Col11a2Q64739 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Col11a2Q64739 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC22.52■■□□□ 1.2
Col11a2Q64739 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC22.52■■□□□ 1.2
Col11a2Q64739 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Col11a2Q64739 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Col11a2Q64739 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Col11a2Q64739 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Col11a2Q64739 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Col11a2Q64739 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Col11a2Q64739 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Col11a2Q64739 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Col11a2Q64739 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Col11a2Q64739 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Col11a2Q64739 Gm27463-201ENSMUST00000183569 57 ntBASIC22.51■■□□□ 1.19
Col11a2Q64739 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Col11a2Q64739 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC22.51■■□□□ 1.19
Col11a2Q64739 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Col11a2Q64739 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Col11a2Q64739 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Col11a2Q64739 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Col11a2Q64739 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Col11a2Q64739 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC22.5■■□□□ 1.19
Col11a2Q64739 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
Col11a2Q64739 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Col11a2Q64739 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Col11a2Q64739 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Col11a2Q64739 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC22.49■■□□□ 1.19
Col11a2Q64739 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Col11a2Q64739 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Col11a2Q64739 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Col11a2Q64739 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Col11a2Q64739 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Col11a2Q64739 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Col11a2Q64739 Gm43353-201ENSMUST00000199224 1295 ntBASIC22.48■■□□□ 1.19
Col11a2Q64739 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Col11a2Q64739 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Col11a2Q64739 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Col11a2Q64739 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Col11a2Q64739 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
Col11a2Q64739 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Col11a2Q64739 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Col11a2Q64739 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Col11a2Q64739 Gm14859-201ENSMUST00000117752 357 ntBASIC22.48■■□□□ 1.19
Col11a2Q64739 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC22.48■■□□□ 1.19
Col11a2Q64739 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Col11a2Q64739 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Col11a2Q64739 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC22.47■■□□□ 1.19
Col11a2Q64739 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
Col11a2Q64739 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC22.47■■□□□ 1.19
Col11a2Q64739 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Col11a2Q64739 Gm4217-201ENSMUST00000182243 1002 ntBASIC22.47■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms