Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
Trim27Q62158 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Trim27Q62158 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Trim27Q62158 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC22.65■■□□□ 1.22
Trim27Q62158 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
Trim27Q62158 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC22.65■■□□□ 1.22
Trim27Q62158 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Trim27Q62158 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Trim27Q62158 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Trim27Q62158 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Trim27Q62158 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Trim27Q62158 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Trim27Q62158 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Trim27Q62158 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Trim27Q62158 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Trim27Q62158 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Trim27Q62158 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Trim27Q62158 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC22.64■■□□□ 1.22
Trim27Q62158 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Trim27Q62158 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
Trim27Q62158 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Trim27Q62158 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC22.64■■□□□ 1.21
Trim27Q62158 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Trim27Q62158 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC22.64■■□□□ 1.21
Trim27Q62158 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC22.64■■□□□ 1.21
Trim27Q62158 Gm7291-201ENSMUST00000199147 382 ntBASIC22.64■■□□□ 1.21
Trim27Q62158 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Trim27Q62158 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
Trim27Q62158 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
Trim27Q62158 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Trim27Q62158 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC22.64■■□□□ 1.21
Trim27Q62158 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Trim27Q62158 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Trim27Q62158 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Trim27Q62158 Grk6-206ENSMUST00000224995 2971 ntBASIC22.63■■□□□ 1.21
Trim27Q62158 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Trim27Q62158 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Trim27Q62158 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Trim27Q62158 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Trim27Q62158 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC22.63■■□□□ 1.21
Trim27Q62158 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC22.63■■□□□ 1.21
Trim27Q62158 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
Trim27Q62158 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Trim27Q62158 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC22.63■■□□□ 1.21
Trim27Q62158 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Trim27Q62158 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC22.63■■□□□ 1.21
Trim27Q62158 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Trim27Q62158 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Trim27Q62158 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC22.62■■□□□ 1.21
Trim27Q62158 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Trim27Q62158 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Trim27Q62158 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC22.62■■□□□ 1.21
Trim27Q62158 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
Trim27Q62158 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Trim27Q62158 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Trim27Q62158 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Trim27Q62158 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Trim27Q62158 Gm13509-201ENSMUST00000119733 1308 ntBASIC22.61■■□□□ 1.21
Trim27Q62158 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Trim27Q62158 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC22.61■■□□□ 1.21
Trim27Q62158 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
Trim27Q62158 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
Trim27Q62158 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Trim27Q62158 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Trim27Q62158 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC22.61■■□□□ 1.21
Trim27Q62158 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Trim27Q62158 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC22.61■■□□□ 1.21
Trim27Q62158 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Trim27Q62158 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Trim27Q62158 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC22.6■■□□□ 1.21
Trim27Q62158 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Trim27Q62158 Gm13148-201ENSMUST00000118892 745 ntBASIC22.6■■□□□ 1.21
Trim27Q62158 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC22.6■■□□□ 1.21
Trim27Q62158 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Trim27Q62158 Gm37179-201ENSMUST00000194862 823 ntBASIC22.6■■□□□ 1.21
Trim27Q62158 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Trim27Q62158 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Trim27Q62158 Gm37563-201ENSMUST00000192580 1513 ntBASIC22.6■■□□□ 1.21
Trim27Q62158 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Trim27Q62158 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC22.6■■□□□ 1.21
Trim27Q62158 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Trim27Q62158 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Trim27Q62158 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Trim27Q62158 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC22.59■■□□□ 1.21
Trim27Q62158 Gm22325-201ENSMUST00000158904 308 ntBASIC22.59■■□□□ 1.21
Trim27Q62158 Gm6211-202ENSMUST00000167849 925 ntBASIC22.59■■□□□ 1.21
Trim27Q62158 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Trim27Q62158 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC22.59■■□□□ 1.21
Trim27Q62158 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC22.59■■□□□ 1.21
Trim27Q62158 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Trim27Q62158 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
Trim27Q62158 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
Trim27Q62158 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Trim27Q62158 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Trim27Q62158 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Trim27Q62158 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
Trim27Q62158 Fst-202ENSMUST00000223640 2612 ntBASIC22.58■■□□□ 1.21
Trim27Q62158 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Trim27Q62158 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Trim27Q62158 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms