Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ripk1Q60855 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ripk1Q60855 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Ripk1Q60855 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ripk1Q60855 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ripk1Q60855 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ripk1Q60855 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.35■□□□□ 0.37
Ripk1Q60855 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ripk1Q60855 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ripk1Q60855 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Ripk1Q60855 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.35■□□□□ 0.37
Ripk1Q60855 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ripk1Q60855 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Ripk1Q60855 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ripk1Q60855 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ripk1Q60855 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ripk1Q60855 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ripk1Q60855 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ripk1Q60855 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ripk1Q60855 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ripk1Q60855 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.34■□□□□ 0.37
Ripk1Q60855 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ripk1Q60855 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ripk1Q60855 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ripk1Q60855 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ripk1Q60855 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ripk1Q60855 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ripk1Q60855 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.34■□□□□ 0.37
Ripk1Q60855 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ripk1Q60855 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ripk1Q60855 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ripk1Q60855 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ripk1Q60855 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ripk1Q60855 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Ripk1Q60855 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Ripk1Q60855 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ripk1Q60855 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.33■□□□□ 0.37
Ripk1Q60855 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ripk1Q60855 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
Ripk1Q60855 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.33■□□□□ 0.36
Ripk1Q60855 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ripk1Q60855 Gm5874-201ENSMUST00000096101 508 ntBASIC17.33■□□□□ 0.36
Ripk1Q60855 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ripk1Q60855 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ripk1Q60855 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ripk1Q60855 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ripk1Q60855 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ripk1Q60855 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.32■□□□□ 0.36
Ripk1Q60855 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
Ripk1Q60855 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ripk1Q60855 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ripk1Q60855 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Ripk1Q60855 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ripk1Q60855 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Ripk1Q60855 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Ripk1Q60855 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ripk1Q60855 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.31■□□□□ 0.36
Ripk1Q60855 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ripk1Q60855 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ripk1Q60855 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ripk1Q60855 Gm10033-202ENSMUST00000211874 928 ntBASIC17.31■□□□□ 0.36
Ripk1Q60855 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ripk1Q60855 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ripk1Q60855 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ripk1Q60855 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.31■□□□□ 0.36
Ripk1Q60855 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ripk1Q60855 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.31■□□□□ 0.36
Ripk1Q60855 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ripk1Q60855 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ripk1Q60855 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ripk1Q60855 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ripk1Q60855 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ripk1Q60855 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ripk1Q60855 Grk6-206ENSMUST00000224995 2971 ntBASIC17.3■□□□□ 0.36
Ripk1Q60855 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.3■□□□□ 0.36
Ripk1Q60855 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ripk1Q60855 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.3■□□□□ 0.36
Ripk1Q60855 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.3■□□□□ 0.36
Ripk1Q60855 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ripk1Q60855 Gm18671-201ENSMUST00000214826 683 ntBASIC17.3■□□□□ 0.36
Ripk1Q60855 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ripk1Q60855 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Ripk1Q60855 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ripk1Q60855 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ripk1Q60855 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ripk1Q60855 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.3■□□□□ 0.36
Ripk1Q60855 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ripk1Q60855 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ripk1Q60855 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Ripk1Q60855 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ripk1Q60855 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.29■□□□□ 0.36
Ripk1Q60855 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ripk1Q60855 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ripk1Q60855 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ripk1Q60855 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.29■□□□□ 0.36
Ripk1Q60855 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ripk1Q60855 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ripk1Q60855 Gm42642-201ENSMUST00000200683 355 ntBASIC17.29■□□□□ 0.36
Ripk1Q60855 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ripk1Q60855 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms