Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Gm12527-201ENSMUST00000117967 564 ntBASIC17.25■□□□□ 0.35
Tnfaip3Q60769 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfaip3Q60769 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfaip3Q60769 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.25■□□□□ 0.35
Tnfaip3Q60769 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfaip3Q60769 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfaip3Q60769 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfaip3Q60769 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfaip3Q60769 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.25■□□□□ 0.35
Tnfaip3Q60769 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfaip3Q60769 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfaip3Q60769 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.25■□□□□ 0.35
Tnfaip3Q60769 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfaip3Q60769 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.24■□□□□ 0.35
Tnfaip3Q60769 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Tnfaip3Q60769 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.24■□□□□ 0.35
Tnfaip3Q60769 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tnfaip3Q60769 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.24■□□□□ 0.35
Tnfaip3Q60769 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Tnfaip3Q60769 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tnfaip3Q60769 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Tnfaip3Q60769 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tnfaip3Q60769 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tnfaip3Q60769 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tnfaip3Q60769 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Tnfaip3Q60769 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tnfaip3Q60769 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfaip3Q60769 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfaip3Q60769 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfaip3Q60769 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfaip3Q60769 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfaip3Q60769 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfaip3Q60769 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfaip3Q60769 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Tnfaip3Q60769 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Tnfaip3Q60769 Gm44549-201ENSMUST00000208351 577 ntBASIC17.23■□□□□ 0.35
Tnfaip3Q60769 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Tnfaip3Q60769 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfaip3Q60769 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfaip3Q60769 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Tnfaip3Q60769 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfaip3Q60769 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfaip3Q60769 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfaip3Q60769 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
Tnfaip3Q60769 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfaip3Q60769 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Tnfaip3Q60769 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Tnfaip3Q60769 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfaip3Q60769 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfaip3Q60769 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.22■□□□□ 0.35
Tnfaip3Q60769 Gm10653-202ENSMUST00000139570 835 ntBASIC17.22■□□□□ 0.35
Tnfaip3Q60769 Gm20760-201ENSMUST00000179197 648 ntBASIC17.22■□□□□ 0.35
Tnfaip3Q60769 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfaip3Q60769 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.22■□□□□ 0.35
Tnfaip3Q60769 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfaip3Q60769 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfaip3Q60769 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfaip3Q60769 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfaip3Q60769 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfaip3Q60769 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfaip3Q60769 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfaip3Q60769 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Tnfaip3Q60769 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfaip3Q60769 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Tnfaip3Q60769 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Tnfaip3Q60769 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfaip3Q60769 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.21■□□□□ 0.35
Tnfaip3Q60769 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Tnfaip3Q60769 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Tnfaip3Q60769 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Tnfaip3Q60769 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfaip3Q60769 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfaip3Q60769 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Tnfaip3Q60769 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfaip3Q60769 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfaip3Q60769 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfaip3Q60769 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfaip3Q60769 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfaip3Q60769 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfaip3Q60769 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfaip3Q60769 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfaip3Q60769 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.2■□□□□ 0.34
Tnfaip3Q60769 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Tnfaip3Q60769 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfaip3Q60769 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfaip3Q60769 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfaip3Q60769 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfaip3Q60769 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tnfaip3Q60769 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tnfaip3Q60769 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tnfaip3Q60769 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Tnfaip3Q60769 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.19■□□□□ 0.34
Tnfaip3Q60769 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Tnfaip3Q60769 Gm2559-201ENSMUST00000201323 363 ntBASIC17.19■□□□□ 0.34
Tnfaip3Q60769 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.19■□□□□ 0.34
Tnfaip3Q60769 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Tnfaip3Q60769 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Tnfaip3Q60769 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Tnfaip3Q60769 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Tnfaip3Q60769 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms