Protein–RNA interactions for Protein: Q5XFR0

Pabpn1l, Embryonic polyadenylate-binding protein 2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1lQ5XFR0 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.43■□□□□ 0.54
Pabpn1lQ5XFR0 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pabpn1lQ5XFR0 Gm40881-201ENSMUST00000223397 166 ntBASIC18.43■□□□□ 0.54
Pabpn1lQ5XFR0 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pabpn1lQ5XFR0 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pabpn1lQ5XFR0 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pabpn1lQ5XFR0 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pabpn1lQ5XFR0 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pabpn1lQ5XFR0 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pabpn1lQ5XFR0 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pabpn1lQ5XFR0 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Pabpn1lQ5XFR0 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pabpn1lQ5XFR0 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pabpn1lQ5XFR0 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pabpn1lQ5XFR0 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pabpn1lQ5XFR0 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pabpn1lQ5XFR0 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Pabpn1lQ5XFR0 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.42■□□□□ 0.54
Pabpn1lQ5XFR0 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.42■□□□□ 0.54
Pabpn1lQ5XFR0 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pabpn1lQ5XFR0 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pabpn1lQ5XFR0 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pabpn1lQ5XFR0 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Pabpn1lQ5XFR0 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pabpn1lQ5XFR0 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pabpn1lQ5XFR0 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Pabpn1lQ5XFR0 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pabpn1lQ5XFR0 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pabpn1lQ5XFR0 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pabpn1lQ5XFR0 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Pabpn1lQ5XFR0 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.41■□□□□ 0.54
Pabpn1lQ5XFR0 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pabpn1lQ5XFR0 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pabpn1lQ5XFR0 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pabpn1lQ5XFR0 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Pabpn1lQ5XFR0 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pabpn1lQ5XFR0 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pabpn1lQ5XFR0 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.4■□□□□ 0.54
Pabpn1lQ5XFR0 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Pabpn1lQ5XFR0 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pabpn1lQ5XFR0 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.4■□□□□ 0.54
Pabpn1lQ5XFR0 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.4■□□□□ 0.54
Pabpn1lQ5XFR0 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.4■□□□□ 0.54
Pabpn1lQ5XFR0 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pabpn1lQ5XFR0 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pabpn1lQ5XFR0 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Pabpn1lQ5XFR0 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pabpn1lQ5XFR0 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pabpn1lQ5XFR0 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pabpn1lQ5XFR0 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Pabpn1lQ5XFR0 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pabpn1lQ5XFR0 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pabpn1lQ5XFR0 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pabpn1lQ5XFR0 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pabpn1lQ5XFR0 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pabpn1lQ5XFR0 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.39■□□□□ 0.53
Pabpn1lQ5XFR0 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pabpn1lQ5XFR0 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pabpn1lQ5XFR0 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.39■□□□□ 0.53
Pabpn1lQ5XFR0 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pabpn1lQ5XFR0 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.39■□□□□ 0.53
Pabpn1lQ5XFR0 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pabpn1lQ5XFR0 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pabpn1lQ5XFR0 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pabpn1lQ5XFR0 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pabpn1lQ5XFR0 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pabpn1lQ5XFR0 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Pabpn1lQ5XFR0 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.38■□□□□ 0.53
Pabpn1lQ5XFR0 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pabpn1lQ5XFR0 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pabpn1lQ5XFR0 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pabpn1lQ5XFR0 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.38■□□□□ 0.53
Pabpn1lQ5XFR0 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.38■□□□□ 0.53
Pabpn1lQ5XFR0 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.38■□□□□ 0.53
Pabpn1lQ5XFR0 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pabpn1lQ5XFR0 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pabpn1lQ5XFR0 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pabpn1lQ5XFR0 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pabpn1lQ5XFR0 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pabpn1lQ5XFR0 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pabpn1lQ5XFR0 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pabpn1lQ5XFR0 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.37■□□□□ 0.53
Pabpn1lQ5XFR0 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pabpn1lQ5XFR0 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pabpn1lQ5XFR0 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pabpn1lQ5XFR0 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Pabpn1lQ5XFR0 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Pabpn1lQ5XFR0 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Pabpn1lQ5XFR0 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pabpn1lQ5XFR0 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.37■□□□□ 0.53
Pabpn1lQ5XFR0 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.37■□□□□ 0.53
Pabpn1lQ5XFR0 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pabpn1lQ5XFR0 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pabpn1lQ5XFR0 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pabpn1lQ5XFR0 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Pabpn1lQ5XFR0 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Pabpn1lQ5XFR0 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pabpn1lQ5XFR0 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.36■□□□□ 0.53
Pabpn1lQ5XFR0 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
Pabpn1lQ5XFR0 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms