Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav7d-3Q5R1I1 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Trav7d-3Q5R1I1 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav7d-3Q5R1I1 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav7d-3Q5R1I1 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav7d-3Q5R1I1 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav7d-3Q5R1I1 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav7d-3Q5R1I1 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav7d-3Q5R1I1 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav7d-3Q5R1I1 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav7d-3Q5R1I1 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav7d-3Q5R1I1 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav7d-3Q5R1I1 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav7d-3Q5R1I1 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav7d-3Q5R1I1 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav7d-3Q5R1I1 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav7d-3Q5R1I1 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC13.5□□□□□ -0.25
Trav7d-3Q5R1I1 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Trav7d-3Q5R1I1 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav7d-3Q5R1I1 Gm45417-201ENSMUST00000209533 758 ntBASIC13.5□□□□□ -0.25
Trav7d-3Q5R1I1 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav7d-3Q5R1I1 Gm40848-201ENSMUST00000221998 324 ntBASIC13.5□□□□□ -0.25
Trav7d-3Q5R1I1 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav7d-3Q5R1I1 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trav7d-3Q5R1I1 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav7d-3Q5R1I1 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC13.5□□□□□ -0.25
Trav7d-3Q5R1I1 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav7d-3Q5R1I1 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav7d-3Q5R1I1 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav7d-3Q5R1I1 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav7d-3Q5R1I1 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC13.49□□□□□ -0.25
Trav7d-3Q5R1I1 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav7d-3Q5R1I1 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav7d-3Q5R1I1 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav7d-3Q5R1I1 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav7d-3Q5R1I1 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav7d-3Q5R1I1 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC13.49□□□□□ -0.25
Trav7d-3Q5R1I1 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
Trav7d-3Q5R1I1 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav7d-3Q5R1I1 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav7d-3Q5R1I1 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
Trav7d-3Q5R1I1 Gm27032-201ENSMUST00000183124 1116 ntBASIC13.49□□□□□ -0.25
Trav7d-3Q5R1I1 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav7d-3Q5R1I1 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav7d-3Q5R1I1 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Trav7d-3Q5R1I1 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trav7d-3Q5R1I1 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav7d-3Q5R1I1 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav7d-3Q5R1I1 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav7d-3Q5R1I1 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav7d-3Q5R1I1 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav7d-3Q5R1I1 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav7d-3Q5R1I1 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav7d-3Q5R1I1 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav7d-3Q5R1I1 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav7d-3Q5R1I1 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC13.48□□□□□ -0.25
Trav7d-3Q5R1I1 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav7d-3Q5R1I1 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav7d-3Q5R1I1 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav7d-3Q5R1I1 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC13.48□□□□□ -0.25
Trav7d-3Q5R1I1 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav7d-3Q5R1I1 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav7d-3Q5R1I1 Gm14281-201ENSMUST00000121700 1294 ntBASIC13.48□□□□□ -0.25
Trav7d-3Q5R1I1 Gm43017-201ENSMUST00000198296 752 ntBASIC13.48□□□□□ -0.25
Trav7d-3Q5R1I1 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav7d-3Q5R1I1 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav7d-3Q5R1I1 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav7d-3Q5R1I1 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav7d-3Q5R1I1 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav7d-3Q5R1I1 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav7d-3Q5R1I1 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav7d-3Q5R1I1 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trav7d-3Q5R1I1 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav7d-3Q5R1I1 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav7d-3Q5R1I1 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav7d-3Q5R1I1 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav7d-3Q5R1I1 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav7d-3Q5R1I1 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav7d-3Q5R1I1 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav7d-3Q5R1I1 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav7d-3Q5R1I1 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav7d-3Q5R1I1 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav7d-3Q5R1I1 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav7d-3Q5R1I1 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav7d-3Q5R1I1 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav7d-3Q5R1I1 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav7d-3Q5R1I1 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trav7d-3Q5R1I1 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav7d-3Q5R1I1 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav7d-3Q5R1I1 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trav7d-3Q5R1I1 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav7d-3Q5R1I1 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav7d-3Q5R1I1 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC13.47□□□□□ -0.25
Trav7d-3Q5R1I1 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC13.47□□□□□ -0.25
Trav7d-3Q5R1I1 Cdc34b-202ENSMUST00000188741 1252 ntBASIC13.47□□□□□ -0.25
Trav7d-3Q5R1I1 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav7d-3Q5R1I1 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Trav7d-3Q5R1I1 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav7d-3Q5R1I1 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav7d-3Q5R1I1 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms