Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Mir7075-201ENSMUST00000184187 82 ntBASIC15.06■□□□□ 0
Trav8d-1Q5R1H8 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC15.06■□□□□ 0
Trav8d-1Q5R1H8 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav8d-1Q5R1H8 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC15.06■□□□□ 0
Trav8d-1Q5R1H8 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC15.06■□□□□ 0
Trav8d-1Q5R1H8 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav8d-1Q5R1H8 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav8d-1Q5R1H8 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Trav8d-1Q5R1H8 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav8d-1Q5R1H8 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav8d-1Q5R1H8 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Trav8d-1Q5R1H8 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav8d-1Q5R1H8 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav8d-1Q5R1H8 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Trav8d-1Q5R1H8 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav8d-1Q5R1H8 Fst-202ENSMUST00000223640 2612 ntBASIC15.05■□□□□ 0
Trav8d-1Q5R1H8 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav8d-1Q5R1H8 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Trav8d-1Q5R1H8 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav8d-1Q5R1H8 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC15.05■□□□□ -0
Trav8d-1Q5R1H8 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav8d-1Q5R1H8 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC15.05■□□□□ -0
Trav8d-1Q5R1H8 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav8d-1Q5R1H8 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav8d-1Q5R1H8 Gm27045-201ENSMUST00000182145 1402 ntBASIC15.05■□□□□ -0
Trav8d-1Q5R1H8 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav8d-1Q5R1H8 Gm10209-201ENSMUST00000203397 1607 ntBASIC15.05■□□□□ -0
Trav8d-1Q5R1H8 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav8d-1Q5R1H8 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav8d-1Q5R1H8 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav8d-1Q5R1H8 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Trav8d-1Q5R1H8 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav8d-1Q5R1H8 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav8d-1Q5R1H8 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav8d-1Q5R1H8 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav8d-1Q5R1H8 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Trav8d-1Q5R1H8 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Trav8d-1Q5R1H8 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav8d-1Q5R1H8 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav8d-1Q5R1H8 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav8d-1Q5R1H8 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav8d-1Q5R1H8 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav8d-1Q5R1H8 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC15.04■□□□□ -0
Trav8d-1Q5R1H8 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav8d-1Q5R1H8 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav8d-1Q5R1H8 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Trav8d-1Q5R1H8 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav8d-1Q5R1H8 Gm9954-202ENSMUST00000198686 4725 ntBASIC15.04■□□□□ -0
Trav8d-1Q5R1H8 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav8d-1Q5R1H8 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav8d-1Q5R1H8 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Trav8d-1Q5R1H8 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Trav8d-1Q5R1H8 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav8d-1Q5R1H8 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav8d-1Q5R1H8 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trav8d-1Q5R1H8 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Trav8d-1Q5R1H8 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav8d-1Q5R1H8 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC15.03■□□□□ -0
Trav8d-1Q5R1H8 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav8d-1Q5R1H8 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav8d-1Q5R1H8 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav8d-1Q5R1H8 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav8d-1Q5R1H8 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav8d-1Q5R1H8 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav8d-1Q5R1H8 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Trav8d-1Q5R1H8 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav8d-1Q5R1H8 Gm8493-201ENSMUST00000196881 489 ntBASIC15.03■□□□□ -0
Trav8d-1Q5R1H8 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC15.03■□□□□ -0
Trav8d-1Q5R1H8 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC15.03■□□□□ -0
Trav8d-1Q5R1H8 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trav8d-1Q5R1H8 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav8d-1Q5R1H8 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav8d-1Q5R1H8 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav8d-1Q5R1H8 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav8d-1Q5R1H8 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav8d-1Q5R1H8 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Trav8d-1Q5R1H8 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav8d-1Q5R1H8 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC15.02■□□□□ -0
Trav8d-1Q5R1H8 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Trav8d-1Q5R1H8 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav8d-1Q5R1H8 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Trav8d-1Q5R1H8 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.02■□□□□ -0
Trav8d-1Q5R1H8 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav8d-1Q5R1H8 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav8d-1Q5R1H8 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Trav8d-1Q5R1H8 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav8d-1Q5R1H8 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
Trav8d-1Q5R1H8 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Trav8d-1Q5R1H8 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav8d-1Q5R1H8 Wdr70-203ENSMUST00000227371 1130 ntBASIC15.02■□□□□ -0
Trav8d-1Q5R1H8 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav8d-1Q5R1H8 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav8d-1Q5R1H8 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav8d-1Q5R1H8 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav8d-1Q5R1H8 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav8d-1Q5R1H8 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trav8d-1Q5R1H8 Gm32699-201ENSMUST00000221728 1988 ntBASIC15.02□□□□□ -0.01
Trav8d-1Q5R1H8 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav8d-1Q5R1H8 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Trav8d-1Q5R1H8 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms