Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Ddx49Q4FZF3 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC21.38■■□□□ 1.01
Ddx49Q4FZF3 Mtag2-201ENSMUST00000058665 714 ntBASIC21.38■■□□□ 1.01
Ddx49Q4FZF3 Gm10819-201ENSMUST00000099988 561 ntBASIC21.38■■□□□ 1.01
Ddx49Q4FZF3 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Ddx49Q4FZF3 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ddx49Q4FZF3 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Ddx49Q4FZF3 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Ddx49Q4FZF3 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ddx49Q4FZF3 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ddx49Q4FZF3 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ddx49Q4FZF3 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC21.37■■□□□ 1.01
Ddx49Q4FZF3 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC21.37■■□□□ 1.01
Ddx49Q4FZF3 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ddx49Q4FZF3 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ddx49Q4FZF3 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ddx49Q4FZF3 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ddx49Q4FZF3 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Ddx49Q4FZF3 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ddx49Q4FZF3 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ddx49Q4FZF3 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ddx49Q4FZF3 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ddx49Q4FZF3 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC21.36■■□□□ 1.01
Ddx49Q4FZF3 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ddx49Q4FZF3 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ddx49Q4FZF3 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ddx49Q4FZF3 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Ddx49Q4FZF3 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ddx49Q4FZF3 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC21.36■■□□□ 1.01
Ddx49Q4FZF3 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ddx49Q4FZF3 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
Ddx49Q4FZF3 Gm30025-201ENSMUST00000218555 728 ntBASIC21.36■■□□□ 1.01
Ddx49Q4FZF3 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ddx49Q4FZF3 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ddx49Q4FZF3 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ddx49Q4FZF3 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ddx49Q4FZF3 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ddx49Q4FZF3 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ddx49Q4FZF3 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ddx49Q4FZF3 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ddx49Q4FZF3 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ddx49Q4FZF3 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ddx49Q4FZF3 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ddx49Q4FZF3 Gm43183-201ENSMUST00000200632 547 ntBASIC21.35■■□□□ 1.01
Ddx49Q4FZF3 Gm21814-202ENSMUST00000203277 873 ntBASIC21.35■■□□□ 1.01
Ddx49Q4FZF3 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC21.35■■□□□ 1.01
Ddx49Q4FZF3 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ddx49Q4FZF3 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ddx49Q4FZF3 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ddx49Q4FZF3 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ddx49Q4FZF3 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ddx49Q4FZF3 Gm5112-201ENSMUST00000204407 2368 ntBASIC21.34■■□□□ 1.01
Ddx49Q4FZF3 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Ddx49Q4FZF3 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ddx49Q4FZF3 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ddx49Q4FZF3 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC21.34■■□□□ 1.01
Ddx49Q4FZF3 Gm21362-201ENSMUST00000194272 928 ntBASIC21.34■■□□□ 1.01
Ddx49Q4FZF3 Arhgef4-208ENSMUST00000211073 171 ntBASIC21.34■■□□□ 1.01
Ddx49Q4FZF3 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ddx49Q4FZF3 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ddx49Q4FZF3 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ddx49Q4FZF3 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ddx49Q4FZF3 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ddx49Q4FZF3 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ddx49Q4FZF3 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ddx49Q4FZF3 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Ddx49Q4FZF3 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Ddx49Q4FZF3 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Ddx49Q4FZF3 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC21.33■■□□□ 1.01
Ddx49Q4FZF3 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC21.33■■□□□ 1.01
Ddx49Q4FZF3 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Ddx49Q4FZF3 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ddx49Q4FZF3 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ddx49Q4FZF3 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Ddx49Q4FZF3 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ddx49Q4FZF3 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
Ddx49Q4FZF3 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC21.32■■□□□ 1
Ddx49Q4FZF3 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ddx49Q4FZF3 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ddx49Q4FZF3 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC21.32■■□□□ 1
Ddx49Q4FZF3 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ddx49Q4FZF3 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC21.31■■□□□ 1
Ddx49Q4FZF3 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Ddx49Q4FZF3 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ddx49Q4FZF3 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ddx49Q4FZF3 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC21.31■■□□□ 1
Ddx49Q4FZF3 Gm16042-201ENSMUST00000204813 1247 ntBASIC21.31■■□□□ 1
Ddx49Q4FZF3 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ddx49Q4FZF3 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ddx49Q4FZF3 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ddx49Q4FZF3 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Ddx49Q4FZF3 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ddx49Q4FZF3 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ddx49Q4FZF3 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC21.3■■□□□ 1
Ddx49Q4FZF3 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Ddx49Q4FZF3 Gm5540-201ENSMUST00000131852 1848 ntBASIC21.3■■□□□ 1
Ddx49Q4FZF3 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ddx49Q4FZF3 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC21.3■■□□□ 1
Ddx49Q4FZF3 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ddx49Q4FZF3 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms