Protein–RNA interactions for Protein: Q3V038

Ttc9, Tetratricopeptide repeat protein 9A, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc9Q3V038 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ttc9Q3V038 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Ttc9Q3V038 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ttc9Q3V038 Gm5643-201ENSMUST00000117081 966 ntBASIC19.68■□□□□ 0.74
Ttc9Q3V038 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.68■□□□□ 0.74
Ttc9Q3V038 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ttc9Q3V038 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ttc9Q3V038 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.68■□□□□ 0.74
Ttc9Q3V038 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Ttc9Q3V038 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ttc9Q3V038 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ttc9Q3V038 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ttc9Q3V038 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.67■□□□□ 0.74
Ttc9Q3V038 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ttc9Q3V038 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.67■□□□□ 0.74
Ttc9Q3V038 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Ttc9Q3V038 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC19.67■□□□□ 0.74
Ttc9Q3V038 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Ttc9Q3V038 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ttc9Q3V038 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ttc9Q3V038 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ttc9Q3V038 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ttc9Q3V038 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ttc9Q3V038 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ttc9Q3V038 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ttc9Q3V038 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ttc9Q3V038 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ttc9Q3V038 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ttc9Q3V038 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ttc9Q3V038 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.66■□□□□ 0.74
Ttc9Q3V038 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ttc9Q3V038 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.66■□□□□ 0.74
Ttc9Q3V038 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ttc9Q3V038 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.66■□□□□ 0.74
Ttc9Q3V038 Rab3c-203ENSMUST00000224180 967 ntBASIC19.66■□□□□ 0.74
Ttc9Q3V038 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ttc9Q3V038 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ttc9Q3V038 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ttc9Q3V038 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.66■□□□□ 0.74
Ttc9Q3V038 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ttc9Q3V038 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ttc9Q3V038 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ttc9Q3V038 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ttc9Q3V038 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ttc9Q3V038 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ttc9Q3V038 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ttc9Q3V038 Gm15565-201ENSMUST00000118890 427 ntBASIC19.65■□□□□ 0.74
Ttc9Q3V038 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.65■□□□□ 0.74
Ttc9Q3V038 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC19.65■□□□□ 0.74
Ttc9Q3V038 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ttc9Q3V038 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Ttc9Q3V038 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.65■□□□□ 0.74
Ttc9Q3V038 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ttc9Q3V038 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ttc9Q3V038 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ttc9Q3V038 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.65■□□□□ 0.74
Ttc9Q3V038 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Ttc9Q3V038 Gm27275-201ENSMUST00000184318 272 ntBASIC19.64■□□□□ 0.73
Ttc9Q3V038 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.64■□□□□ 0.73
Ttc9Q3V038 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ttc9Q3V038 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ttc9Q3V038 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.64■□□□□ 0.73
Ttc9Q3V038 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ttc9Q3V038 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.64■□□□□ 0.73
Ttc9Q3V038 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ttc9Q3V038 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ttc9Q3V038 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Ttc9Q3V038 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ttc9Q3V038 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ttc9Q3V038 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ttc9Q3V038 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Ttc9Q3V038 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ttc9Q3V038 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.63■□□□□ 0.73
Ttc9Q3V038 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ttc9Q3V038 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ttc9Q3V038 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ttc9Q3V038 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ttc9Q3V038 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Ttc9Q3V038 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ttc9Q3V038 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ttc9Q3V038 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ttc9Q3V038 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.62■□□□□ 0.73
Ttc9Q3V038 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ttc9Q3V038 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ttc9Q3V038 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.62■□□□□ 0.73
Ttc9Q3V038 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ttc9Q3V038 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ttc9Q3V038 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ttc9Q3V038 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Ttc9Q3V038 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Ttc9Q3V038 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Ttc9Q3V038 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ttc9Q3V038 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ttc9Q3V038 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ttc9Q3V038 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ttc9Q3V038 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Ttc9Q3V038 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ttc9Q3V038 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ttc9Q3V038 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC19.61■□□□□ 0.73
Ttc9Q3V038 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms