Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Cdkl5Q3UTQ8 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cdkl5Q3UTQ8 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cdkl5Q3UTQ8 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cdkl5Q3UTQ8 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cdkl5Q3UTQ8 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1
Cdkl5Q3UTQ8 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC21.33■■□□□ 1
Cdkl5Q3UTQ8 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Cdkl5Q3UTQ8 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC21.32■■□□□ 1
Cdkl5Q3UTQ8 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cdkl5Q3UTQ8 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cdkl5Q3UTQ8 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC21.32■■□□□ 1
Cdkl5Q3UTQ8 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cdkl5Q3UTQ8 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cdkl5Q3UTQ8 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cdkl5Q3UTQ8 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cdkl5Q3UTQ8 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cdkl5Q3UTQ8 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cdkl5Q3UTQ8 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC21.31■■□□□ 1
Cdkl5Q3UTQ8 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
Cdkl5Q3UTQ8 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cdkl5Q3UTQ8 Gm9194-201ENSMUST00000220749 1447 ntBASIC21.31■■□□□ 1
Cdkl5Q3UTQ8 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cdkl5Q3UTQ8 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Cdkl5Q3UTQ8 AC107452.1-201ENSMUST00000227963 481 ntBASIC21.31■■□□□ 1
Cdkl5Q3UTQ8 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC21.31■■□□□ 1
Cdkl5Q3UTQ8 Gm42922-201ENSMUST00000195887 2078 ntBASIC21.3■■□□□ 1
Cdkl5Q3UTQ8 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC21.3■■□□□ 1
Cdkl5Q3UTQ8 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Cdkl5Q3UTQ8 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Cdkl5Q3UTQ8 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cdkl5Q3UTQ8 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC21.3■■□□□ 1
Cdkl5Q3UTQ8 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Cdkl5Q3UTQ8 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC21.3■■□□□ 1
Cdkl5Q3UTQ8 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cdkl5Q3UTQ8 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC21.29■■□□□ 1
Cdkl5Q3UTQ8 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cdkl5Q3UTQ8 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Cdkl5Q3UTQ8 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cdkl5Q3UTQ8 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cdkl5Q3UTQ8 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Cdkl5Q3UTQ8 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC21.29■■□□□ 1
Cdkl5Q3UTQ8 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC21.29■■□□□ 1
Cdkl5Q3UTQ8 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
Cdkl5Q3UTQ8 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cdkl5Q3UTQ8 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cdkl5Q3UTQ8 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cdkl5Q3UTQ8 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cdkl5Q3UTQ8 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cdkl5Q3UTQ8 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC21.28■■□□□ 1
Cdkl5Q3UTQ8 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.28■■□□□ 1
Cdkl5Q3UTQ8 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
Cdkl5Q3UTQ8 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cdkl5Q3UTQ8 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cdkl5Q3UTQ8 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cdkl5Q3UTQ8 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cdkl5Q3UTQ8 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Cdkl5Q3UTQ8 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cdkl5Q3UTQ8 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Cdkl5Q3UTQ8 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cdkl5Q3UTQ8 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cdkl5Q3UTQ8 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cdkl5Q3UTQ8 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Cdkl5Q3UTQ8 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cdkl5Q3UTQ8 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cdkl5Q3UTQ8 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cdkl5Q3UTQ8 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC21.27■■□□□ 1
Cdkl5Q3UTQ8 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cdkl5Q3UTQ8 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC21.27■■□□□ 1
Cdkl5Q3UTQ8 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Cdkl5Q3UTQ8 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cdkl5Q3UTQ8 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cdkl5Q3UTQ8 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cdkl5Q3UTQ8 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC21.27■■□□□ 1
Cdkl5Q3UTQ8 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Cdkl5Q3UTQ8 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Cdkl5Q3UTQ8 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC21.27■■□□□ 1
Cdkl5Q3UTQ8 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cdkl5Q3UTQ8 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Cdkl5Q3UTQ8 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Cdkl5Q3UTQ8 Gm43672-201ENSMUST00000199072 1731 ntBASIC21.26■□□□□ 0.99
Cdkl5Q3UTQ8 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cdkl5Q3UTQ8 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cdkl5Q3UTQ8 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cdkl5Q3UTQ8 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cdkl5Q3UTQ8 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cdkl5Q3UTQ8 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cdkl5Q3UTQ8 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cdkl5Q3UTQ8 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cdkl5Q3UTQ8 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC21.26■□□□□ 0.99
Cdkl5Q3UTQ8 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cdkl5Q3UTQ8 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cdkl5Q3UTQ8 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
Cdkl5Q3UTQ8 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Cdkl5Q3UTQ8 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC21.25■□□□□ 0.99
Cdkl5Q3UTQ8 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
Cdkl5Q3UTQ8 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cdkl5Q3UTQ8 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cdkl5Q3UTQ8 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Cdkl5Q3UTQ8 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms