Protein–RNA interactions for Protein: Q3URI6

Zfp560, Zinc finger protein 560, mousemouse

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp560Q3URI6 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Zfp560Q3URI6 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.45■□□□□ 0.54
Zfp560Q3URI6 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Zfp560Q3URI6 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Zfp560Q3URI6 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
Zfp560Q3URI6 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Zfp560Q3URI6 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Zfp560Q3URI6 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Zfp560Q3URI6 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Zfp560Q3URI6 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Zfp560Q3URI6 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Zfp560Q3URI6 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Zfp560Q3URI6 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.44■□□□□ 0.54
Zfp560Q3URI6 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.44■□□□□ 0.54
Zfp560Q3URI6 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.44■□□□□ 0.54
Zfp560Q3URI6 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.44■□□□□ 0.54
Zfp560Q3URI6 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.44■□□□□ 0.54
Zfp560Q3URI6 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.44■□□□□ 0.54
Zfp560Q3URI6 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Zfp560Q3URI6 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Zfp560Q3URI6 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Zfp560Q3URI6 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Zfp560Q3URI6 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Zfp560Q3URI6 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.44■□□□□ 0.54
Zfp560Q3URI6 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Zfp560Q3URI6 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Zfp560Q3URI6 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.43■□□□□ 0.54
Zfp560Q3URI6 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Zfp560Q3URI6 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.43■□□□□ 0.54
Zfp560Q3URI6 Gm6211-202ENSMUST00000167849 925 ntBASIC18.43■□□□□ 0.54
Zfp560Q3URI6 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Zfp560Q3URI6 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.43■□□□□ 0.54
Zfp560Q3URI6 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Zfp560Q3URI6 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Zfp560Q3URI6 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Zfp560Q3URI6 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Zfp560Q3URI6 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.42■□□□□ 0.54
Zfp560Q3URI6 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Zfp560Q3URI6 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Zfp560Q3URI6 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Zfp560Q3URI6 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Zfp560Q3URI6 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.42■□□□□ 0.54
Zfp560Q3URI6 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.42■□□□□ 0.54
Zfp560Q3URI6 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
Zfp560Q3URI6 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Zfp560Q3URI6 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Zfp560Q3URI6 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Zfp560Q3URI6 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Zfp560Q3URI6 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Zfp560Q3URI6 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Zfp560Q3URI6 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.41■□□□□ 0.54
Zfp560Q3URI6 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Zfp560Q3URI6 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Zfp560Q3URI6 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.41■□□□□ 0.54
Zfp560Q3URI6 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Zfp560Q3URI6 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
Zfp560Q3URI6 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.41■□□□□ 0.54
Zfp560Q3URI6 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Zfp560Q3URI6 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.41■□□□□ 0.54
Zfp560Q3URI6 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Zfp560Q3URI6 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Zfp560Q3URI6 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Zfp560Q3URI6 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Zfp560Q3URI6 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Zfp560Q3URI6 Gm10602-201ENSMUST00000098239 609 ntBASIC18.41■□□□□ 0.54
Zfp560Q3URI6 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Zfp560Q3URI6 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Zfp560Q3URI6 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Zfp560Q3URI6 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Zfp560Q3URI6 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Zfp560Q3URI6 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Zfp560Q3URI6 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Zfp560Q3URI6 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Zfp560Q3URI6 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Zfp560Q3URI6 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Zfp560Q3URI6 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Zfp560Q3URI6 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Zfp560Q3URI6 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Zfp560Q3URI6 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Zfp560Q3URI6 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.4■□□□□ 0.54
Zfp560Q3URI6 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Zfp560Q3URI6 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Zfp560Q3URI6 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.4■□□□□ 0.54
Zfp560Q3URI6 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Zfp560Q3URI6 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Zfp560Q3URI6 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Zfp560Q3URI6 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Zfp560Q3URI6 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Zfp560Q3URI6 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Zfp560Q3URI6 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Zfp560Q3URI6 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Zfp560Q3URI6 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Zfp560Q3URI6 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Zfp560Q3URI6 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.39■□□□□ 0.53
Zfp560Q3URI6 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Zfp560Q3URI6 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Zfp560Q3URI6 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Zfp560Q3URI6 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Zfp560Q3URI6 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Zfp560Q3URI6 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms