Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Nlrc4Q3UP24 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nlrc4Q3UP24 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.39■□□□□ 0.69
Nlrc4Q3UP24 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nlrc4Q3UP24 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nlrc4Q3UP24 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nlrc4Q3UP24 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nlrc4Q3UP24 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nlrc4Q3UP24 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nlrc4Q3UP24 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nlrc4Q3UP24 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.38■□□□□ 0.69
Nlrc4Q3UP24 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.38■□□□□ 0.69
Nlrc4Q3UP24 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nlrc4Q3UP24 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nlrc4Q3UP24 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nlrc4Q3UP24 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nlrc4Q3UP24 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nlrc4Q3UP24 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nlrc4Q3UP24 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nlrc4Q3UP24 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nlrc4Q3UP24 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nlrc4Q3UP24 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.37■□□□□ 0.69
Nlrc4Q3UP24 Gm12441-201ENSMUST00000121806 588 ntBASIC19.37■□□□□ 0.69
Nlrc4Q3UP24 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Nlrc4Q3UP24 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.37■□□□□ 0.69
Nlrc4Q3UP24 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Nlrc4Q3UP24 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nlrc4Q3UP24 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Nlrc4Q3UP24 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nlrc4Q3UP24 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nlrc4Q3UP24 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nlrc4Q3UP24 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nlrc4Q3UP24 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.36■□□□□ 0.69
Nlrc4Q3UP24 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nlrc4Q3UP24 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nlrc4Q3UP24 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nlrc4Q3UP24 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nlrc4Q3UP24 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nlrc4Q3UP24 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
Nlrc4Q3UP24 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nlrc4Q3UP24 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nlrc4Q3UP24 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nlrc4Q3UP24 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nlrc4Q3UP24 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nlrc4Q3UP24 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Nlrc4Q3UP24 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.35■□□□□ 0.69
Nlrc4Q3UP24 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.35■□□□□ 0.69
Nlrc4Q3UP24 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nlrc4Q3UP24 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nlrc4Q3UP24 Gm22325-201ENSMUST00000158904 308 ntBASIC19.35■□□□□ 0.69
Nlrc4Q3UP24 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.35■□□□□ 0.69
Nlrc4Q3UP24 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nlrc4Q3UP24 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nlrc4Q3UP24 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nlrc4Q3UP24 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nlrc4Q3UP24 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nlrc4Q3UP24 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nlrc4Q3UP24 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nlrc4Q3UP24 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nlrc4Q3UP24 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nlrc4Q3UP24 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Nlrc4Q3UP24 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.34■□□□□ 0.69
Nlrc4Q3UP24 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nlrc4Q3UP24 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Nlrc4Q3UP24 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Nlrc4Q3UP24 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nlrc4Q3UP24 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nlrc4Q3UP24 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.34■□□□□ 0.69
Nlrc4Q3UP24 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nlrc4Q3UP24 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nlrc4Q3UP24 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nlrc4Q3UP24 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nlrc4Q3UP24 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.33■□□□□ 0.68
Nlrc4Q3UP24 Gm44549-201ENSMUST00000208351 577 ntBASIC19.33■□□□□ 0.68
Nlrc4Q3UP24 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.33■□□□□ 0.68
Nlrc4Q3UP24 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nlrc4Q3UP24 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nlrc4Q3UP24 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nlrc4Q3UP24 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Nlrc4Q3UP24 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nlrc4Q3UP24 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nlrc4Q3UP24 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nlrc4Q3UP24 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Nlrc4Q3UP24 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nlrc4Q3UP24 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.32■□□□□ 0.68
Nlrc4Q3UP24 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.32■□□□□ 0.68
Nlrc4Q3UP24 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nlrc4Q3UP24 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nlrc4Q3UP24 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nlrc4Q3UP24 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nlrc4Q3UP24 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nlrc4Q3UP24 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nlrc4Q3UP24 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Nlrc4Q3UP24 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nlrc4Q3UP24 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Nlrc4Q3UP24 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nlrc4Q3UP24 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nlrc4Q3UP24 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Nlrc4Q3UP24 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nlrc4Q3UP24 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms