Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Naf1Q3UMQ8 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Naf1Q3UMQ8 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Naf1Q3UMQ8 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Naf1Q3UMQ8 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Naf1Q3UMQ8 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Naf1Q3UMQ8 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
Naf1Q3UMQ8 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.67■□□□□ 0.58
Naf1Q3UMQ8 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Naf1Q3UMQ8 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.67■□□□□ 0.58
Naf1Q3UMQ8 Gm5643-201ENSMUST00000117081 966 ntBASIC18.67■□□□□ 0.58
Naf1Q3UMQ8 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.67■□□□□ 0.58
Naf1Q3UMQ8 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Naf1Q3UMQ8 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Naf1Q3UMQ8 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Naf1Q3UMQ8 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Naf1Q3UMQ8 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Naf1Q3UMQ8 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.66■□□□□ 0.58
Naf1Q3UMQ8 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Naf1Q3UMQ8 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.66■□□□□ 0.58
Naf1Q3UMQ8 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Naf1Q3UMQ8 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Naf1Q3UMQ8 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Naf1Q3UMQ8 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Naf1Q3UMQ8 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Naf1Q3UMQ8 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Naf1Q3UMQ8 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Naf1Q3UMQ8 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.66■□□□□ 0.58
Naf1Q3UMQ8 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Naf1Q3UMQ8 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Naf1Q3UMQ8 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Naf1Q3UMQ8 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Naf1Q3UMQ8 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Naf1Q3UMQ8 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Naf1Q3UMQ8 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Naf1Q3UMQ8 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.65■□□□□ 0.58
Naf1Q3UMQ8 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Naf1Q3UMQ8 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Naf1Q3UMQ8 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Naf1Q3UMQ8 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Naf1Q3UMQ8 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.65■□□□□ 0.58
Naf1Q3UMQ8 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Naf1Q3UMQ8 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Naf1Q3UMQ8 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Naf1Q3UMQ8 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Naf1Q3UMQ8 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Naf1Q3UMQ8 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Naf1Q3UMQ8 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Naf1Q3UMQ8 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Naf1Q3UMQ8 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Naf1Q3UMQ8 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Naf1Q3UMQ8 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.64■□□□□ 0.57
Naf1Q3UMQ8 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Naf1Q3UMQ8 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Naf1Q3UMQ8 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.64■□□□□ 0.57
Naf1Q3UMQ8 Gm10252-201ENSMUST00000209541 832 ntBASIC18.64■□□□□ 0.57
Naf1Q3UMQ8 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Naf1Q3UMQ8 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Naf1Q3UMQ8 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Naf1Q3UMQ8 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.64■□□□□ 0.57
Naf1Q3UMQ8 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Naf1Q3UMQ8 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Naf1Q3UMQ8 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Naf1Q3UMQ8 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Naf1Q3UMQ8 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Naf1Q3UMQ8 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Naf1Q3UMQ8 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Naf1Q3UMQ8 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Naf1Q3UMQ8 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Naf1Q3UMQ8 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Naf1Q3UMQ8 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Naf1Q3UMQ8 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Naf1Q3UMQ8 Gm10812-201ENSMUST00000099864 546 ntBASIC18.63■□□□□ 0.57
Naf1Q3UMQ8 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Naf1Q3UMQ8 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Naf1Q3UMQ8 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Naf1Q3UMQ8 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Naf1Q3UMQ8 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.63■□□□□ 0.57
Naf1Q3UMQ8 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Naf1Q3UMQ8 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Naf1Q3UMQ8 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.62■□□□□ 0.57
Naf1Q3UMQ8 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Naf1Q3UMQ8 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Naf1Q3UMQ8 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Naf1Q3UMQ8 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.62■□□□□ 0.57
Naf1Q3UMQ8 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.62■□□□□ 0.57
Naf1Q3UMQ8 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Naf1Q3UMQ8 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Naf1Q3UMQ8 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Naf1Q3UMQ8 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Naf1Q3UMQ8 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Naf1Q3UMQ8 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Naf1Q3UMQ8 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Naf1Q3UMQ8 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Naf1Q3UMQ8 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Naf1Q3UMQ8 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Naf1Q3UMQ8 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Naf1Q3UMQ8 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Naf1Q3UMQ8 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Naf1Q3UMQ8 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms