Protein–RNA interactions for Protein: Q3UHJ8

Rnf44, RING finger protein 44, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf44Q3UHJ8 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.8■□□□□ 0.44
Rnf44Q3UHJ8 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf44Q3UHJ8 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf44Q3UHJ8 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf44Q3UHJ8 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf44Q3UHJ8 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf44Q3UHJ8 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf44Q3UHJ8 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf44Q3UHJ8 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf44Q3UHJ8 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Rnf44Q3UHJ8 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Rnf44Q3UHJ8 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf44Q3UHJ8 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.79■□□□□ 0.44
Rnf44Q3UHJ8 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf44Q3UHJ8 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf44Q3UHJ8 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf44Q3UHJ8 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf44Q3UHJ8 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Rnf44Q3UHJ8 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf44Q3UHJ8 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf44Q3UHJ8 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Rnf44Q3UHJ8 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf44Q3UHJ8 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Rnf44Q3UHJ8 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf44Q3UHJ8 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf44Q3UHJ8 Iqck-206ENSMUST00000208658 2891 ntBASIC17.78■□□□□ 0.44
Rnf44Q3UHJ8 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf44Q3UHJ8 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf44Q3UHJ8 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Rnf44Q3UHJ8 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Rnf44Q3UHJ8 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf44Q3UHJ8 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf44Q3UHJ8 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf44Q3UHJ8 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.78■□□□□ 0.44
Rnf44Q3UHJ8 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.77■□□□□ 0.44
Rnf44Q3UHJ8 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Rnf44Q3UHJ8 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf44Q3UHJ8 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf44Q3UHJ8 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf44Q3UHJ8 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf44Q3UHJ8 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.77■□□□□ 0.44
Rnf44Q3UHJ8 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf44Q3UHJ8 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf44Q3UHJ8 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf44Q3UHJ8 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Rnf44Q3UHJ8 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf44Q3UHJ8 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.77■□□□□ 0.44
Rnf44Q3UHJ8 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.77■□□□□ 0.44
Rnf44Q3UHJ8 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf44Q3UHJ8 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Rnf44Q3UHJ8 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf44Q3UHJ8 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rnf44Q3UHJ8 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rnf44Q3UHJ8 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rnf44Q3UHJ8 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Rnf44Q3UHJ8 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rnf44Q3UHJ8 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rnf44Q3UHJ8 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.76■□□□□ 0.43
Rnf44Q3UHJ8 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.76■□□□□ 0.43
Rnf44Q3UHJ8 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf44Q3UHJ8 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
Rnf44Q3UHJ8 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf44Q3UHJ8 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.76■□□□□ 0.43
Rnf44Q3UHJ8 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
Rnf44Q3UHJ8 Gm26524-201ENSMUST00000192339 390 ntBASIC17.76■□□□□ 0.43
Rnf44Q3UHJ8 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Rnf44Q3UHJ8 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf44Q3UHJ8 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf44Q3UHJ8 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf44Q3UHJ8 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf44Q3UHJ8 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Rnf44Q3UHJ8 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf44Q3UHJ8 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf44Q3UHJ8 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Rnf44Q3UHJ8 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf44Q3UHJ8 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Rnf44Q3UHJ8 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Rnf44Q3UHJ8 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf44Q3UHJ8 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Rnf44Q3UHJ8 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf44Q3UHJ8 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf44Q3UHJ8 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf44Q3UHJ8 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.75■□□□□ 0.43
Rnf44Q3UHJ8 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf44Q3UHJ8 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.74■□□□□ 0.43
Rnf44Q3UHJ8 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.74■□□□□ 0.43
Rnf44Q3UHJ8 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rnf44Q3UHJ8 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rnf44Q3UHJ8 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rnf44Q3UHJ8 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rnf44Q3UHJ8 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rnf44Q3UHJ8 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rnf44Q3UHJ8 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rnf44Q3UHJ8 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.74■□□□□ 0.43
Rnf44Q3UHJ8 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.74■□□□□ 0.43
Rnf44Q3UHJ8 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Rnf44Q3UHJ8 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rnf44Q3UHJ8 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rnf44Q3UHJ8 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rnf44Q3UHJ8 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms