Protein–RNA interactions for Protein: Q3UH99

Shisa6, Protein shisa-6 homolog, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa6Q3UH99 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shisa6Q3UH99 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Shisa6Q3UH99 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Shisa6Q3UH99 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.66■□□□□ 0.26
Shisa6Q3UH99 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.66■□□□□ 0.26
Shisa6Q3UH99 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.66■□□□□ 0.26
Shisa6Q3UH99 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Shisa6Q3UH99 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.66■□□□□ 0.26
Shisa6Q3UH99 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shisa6Q3UH99 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Shisa6Q3UH99 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Shisa6Q3UH99 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.66■□□□□ 0.26
Shisa6Q3UH99 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Shisa6Q3UH99 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shisa6Q3UH99 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shisa6Q3UH99 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Shisa6Q3UH99 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shisa6Q3UH99 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Shisa6Q3UH99 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shisa6Q3UH99 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shisa6Q3UH99 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Shisa6Q3UH99 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Shisa6Q3UH99 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shisa6Q3UH99 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shisa6Q3UH99 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shisa6Q3UH99 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Shisa6Q3UH99 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.65■□□□□ 0.26
Shisa6Q3UH99 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Shisa6Q3UH99 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shisa6Q3UH99 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shisa6Q3UH99 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Shisa6Q3UH99 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Shisa6Q3UH99 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shisa6Q3UH99 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shisa6Q3UH99 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Shisa6Q3UH99 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Shisa6Q3UH99 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Shisa6Q3UH99 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Shisa6Q3UH99 Gm38285-201ENSMUST00000192928 922 ntBASIC16.64■□□□□ 0.25
Shisa6Q3UH99 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.64■□□□□ 0.25
Shisa6Q3UH99 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Shisa6Q3UH99 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Shisa6Q3UH99 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Shisa6Q3UH99 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Shisa6Q3UH99 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Shisa6Q3UH99 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Shisa6Q3UH99 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Shisa6Q3UH99 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shisa6Q3UH99 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.63■□□□□ 0.25
Shisa6Q3UH99 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shisa6Q3UH99 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shisa6Q3UH99 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shisa6Q3UH99 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shisa6Q3UH99 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shisa6Q3UH99 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shisa6Q3UH99 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.63■□□□□ 0.25
Shisa6Q3UH99 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.63■□□□□ 0.25
Shisa6Q3UH99 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.63■□□□□ 0.25
Shisa6Q3UH99 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Shisa6Q3UH99 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shisa6Q3UH99 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shisa6Q3UH99 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shisa6Q3UH99 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Shisa6Q3UH99 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Shisa6Q3UH99 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Shisa6Q3UH99 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shisa6Q3UH99 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Shisa6Q3UH99 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shisa6Q3UH99 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.62■□□□□ 0.25
Shisa6Q3UH99 Mir7071-201ENSMUST00000184847 69 ntBASIC16.62■□□□□ 0.25
Shisa6Q3UH99 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.62■□□□□ 0.25
Shisa6Q3UH99 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shisa6Q3UH99 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shisa6Q3UH99 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shisa6Q3UH99 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC16.62■□□□□ 0.25
Shisa6Q3UH99 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shisa6Q3UH99 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Shisa6Q3UH99 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Shisa6Q3UH99 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Shisa6Q3UH99 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shisa6Q3UH99 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shisa6Q3UH99 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Shisa6Q3UH99 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Shisa6Q3UH99 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Shisa6Q3UH99 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Shisa6Q3UH99 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Shisa6Q3UH99 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shisa6Q3UH99 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shisa6Q3UH99 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shisa6Q3UH99 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shisa6Q3UH99 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shisa6Q3UH99 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shisa6Q3UH99 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Shisa6Q3UH99 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shisa6Q3UH99 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Shisa6Q3UH99 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shisa6Q3UH99 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shisa6Q3UH99 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
Shisa6Q3UH99 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.6■□□□□ 0.25
Shisa6Q3UH99 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms