Protein–RNA interactions for Protein: Q3U898

Cops9, COP9 signalosome complex subunit 9, mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops9Q3U898 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cops9Q3U898 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cops9Q3U898 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cops9Q3U898 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Cops9Q3U898 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cops9Q3U898 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cops9Q3U898 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Cops9Q3U898 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cops9Q3U898 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cops9Q3U898 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cops9Q3U898 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cops9Q3U898 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cops9Q3U898 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Cops9Q3U898 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cops9Q3U898 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Cops9Q3U898 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Cops9Q3U898 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cops9Q3U898 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cops9Q3U898 Dmtn-210ENSMUST00000228824 2377 ntBASIC12.69□□□□□ -0.38
Cops9Q3U898 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cops9Q3U898 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cops9Q3U898 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cops9Q3U898 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cops9Q3U898 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cops9Q3U898 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cops9Q3U898 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC12.68□□□□□ -0.38
Cops9Q3U898 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC12.68□□□□□ -0.38
Cops9Q3U898 Gm8969-201ENSMUST00000199694 526 ntBASIC12.68□□□□□ -0.38
Cops9Q3U898 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Cops9Q3U898 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Cops9Q3U898 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Cops9Q3U898 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Cops9Q3U898 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cops9Q3U898 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cops9Q3U898 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Cops9Q3U898 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Cops9Q3U898 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cops9Q3U898 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cops9Q3U898 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cops9Q3U898 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cops9Q3U898 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cops9Q3U898 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cops9Q3U898 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Cops9Q3U898 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cops9Q3U898 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cops9Q3U898 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cops9Q3U898 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cops9Q3U898 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cops9Q3U898 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Cops9Q3U898 Gm43530-201ENSMUST00000195920 274 ntBASIC12.67□□□□□ -0.38
Cops9Q3U898 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cops9Q3U898 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cops9Q3U898 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cops9Q3U898 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Cops9Q3U898 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cops9Q3U898 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cops9Q3U898 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Cops9Q3U898 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC12.67□□□□□ -0.38
Cops9Q3U898 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Cops9Q3U898 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cops9Q3U898 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cops9Q3U898 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cops9Q3U898 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Cops9Q3U898 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cops9Q3U898 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cops9Q3U898 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cops9Q3U898 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC12.66□□□□□ -0.38
Cops9Q3U898 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cops9Q3U898 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cops9Q3U898 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cops9Q3U898 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Cops9Q3U898 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Cops9Q3U898 Gm14523-201ENSMUST00000117260 558 ntBASIC12.66□□□□□ -0.38
Cops9Q3U898 Gm16464-201ENSMUST00000117815 1095 ntBASIC12.66□□□□□ -0.38
Cops9Q3U898 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Cops9Q3U898 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cops9Q3U898 AC154266.1-201ENSMUST00000223190 503 ntBASIC12.66□□□□□ -0.38
Cops9Q3U898 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Cops9Q3U898 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cops9Q3U898 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cops9Q3U898 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cops9Q3U898 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC12.66□□□□□ -0.38
Cops9Q3U898 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cops9Q3U898 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Cops9Q3U898 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cops9Q3U898 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cops9Q3U898 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cops9Q3U898 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cops9Q3U898 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC12.66□□□□□ -0.38
Cops9Q3U898 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cops9Q3U898 Dmtn-207ENSMUST00000228001 2437 ntBASIC12.66□□□□□ -0.38
Cops9Q3U898 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Cops9Q3U898 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cops9Q3U898 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cops9Q3U898 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cops9Q3U898 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cops9Q3U898 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cops9Q3U898 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Cops9Q3U898 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cops9Q3U898 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms