Protein–RNA interactions for Protein: Q3TZA2

Cdkl4, Cyclin-dependent kinase-like 4, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl4Q3TZA2 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.45■□□□□ 0.54
Cdkl4Q3TZA2 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdkl4Q3TZA2 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.45■□□□□ 0.54
Cdkl4Q3TZA2 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdkl4Q3TZA2 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdkl4Q3TZA2 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cdkl4Q3TZA2 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdkl4Q3TZA2 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdkl4Q3TZA2 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdkl4Q3TZA2 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.44■□□□□ 0.54
Cdkl4Q3TZA2 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdkl4Q3TZA2 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Cdkl4Q3TZA2 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdkl4Q3TZA2 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Cdkl4Q3TZA2 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Cdkl4Q3TZA2 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdkl4Q3TZA2 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Cdkl4Q3TZA2 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cdkl4Q3TZA2 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cdkl4Q3TZA2 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
Cdkl4Q3TZA2 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cdkl4Q3TZA2 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdkl4Q3TZA2 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cdkl4Q3TZA2 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.43■□□□□ 0.54
Cdkl4Q3TZA2 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdkl4Q3TZA2 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.43■□□□□ 0.54
Cdkl4Q3TZA2 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cdkl4Q3TZA2 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.43■□□□□ 0.54
Cdkl4Q3TZA2 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.43■□□□□ 0.54
Cdkl4Q3TZA2 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Cdkl4Q3TZA2 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Cdkl4Q3TZA2 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdkl4Q3TZA2 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdkl4Q3TZA2 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.43■□□□□ 0.54
Cdkl4Q3TZA2 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdkl4Q3TZA2 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdkl4Q3TZA2 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdkl4Q3TZA2 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdkl4Q3TZA2 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cdkl4Q3TZA2 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdkl4Q3TZA2 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdkl4Q3TZA2 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.42■□□□□ 0.54
Cdkl4Q3TZA2 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdkl4Q3TZA2 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Cdkl4Q3TZA2 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdkl4Q3TZA2 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Cdkl4Q3TZA2 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.42■□□□□ 0.54
Cdkl4Q3TZA2 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdkl4Q3TZA2 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdkl4Q3TZA2 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdkl4Q3TZA2 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdkl4Q3TZA2 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Cdkl4Q3TZA2 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cdkl4Q3TZA2 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cdkl4Q3TZA2 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cdkl4Q3TZA2 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdkl4Q3TZA2 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdkl4Q3TZA2 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cdkl4Q3TZA2 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdkl4Q3TZA2 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Cdkl4Q3TZA2 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdkl4Q3TZA2 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cdkl4Q3TZA2 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdkl4Q3TZA2 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdkl4Q3TZA2 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdkl4Q3TZA2 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdkl4Q3TZA2 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdkl4Q3TZA2 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdkl4Q3TZA2 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdkl4Q3TZA2 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cdkl4Q3TZA2 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cdkl4Q3TZA2 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.41■□□□□ 0.54
Cdkl4Q3TZA2 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.41■□□□□ 0.54
Cdkl4Q3TZA2 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Cdkl4Q3TZA2 Golph3-205ENSMUST00000228671 2842 ntBASIC18.41■□□□□ 0.54
Cdkl4Q3TZA2 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdkl4Q3TZA2 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.41■□□□□ 0.54
Cdkl4Q3TZA2 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdkl4Q3TZA2 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdkl4Q3TZA2 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdkl4Q3TZA2 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdkl4Q3TZA2 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdkl4Q3TZA2 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdkl4Q3TZA2 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdkl4Q3TZA2 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.4■□□□□ 0.54
Cdkl4Q3TZA2 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cdkl4Q3TZA2 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdkl4Q3TZA2 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdkl4Q3TZA2 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.4■□□□□ 0.54
Cdkl4Q3TZA2 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cdkl4Q3TZA2 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.4■□□□□ 0.54
Cdkl4Q3TZA2 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Cdkl4Q3TZA2 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cdkl4Q3TZA2 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.4■□□□□ 0.54
Cdkl4Q3TZA2 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.4■□□□□ 0.54
Cdkl4Q3TZA2 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdkl4Q3TZA2 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdkl4Q3TZA2 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Cdkl4Q3TZA2 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Cdkl4Q3TZA2 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.39■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms