Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.47■□□□□ 0.39
Khdc4Q3TCX3 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Khdc4Q3TCX3 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.47■□□□□ 0.39
Khdc4Q3TCX3 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Khdc4Q3TCX3 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Khdc4Q3TCX3 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Khdc4Q3TCX3 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Khdc4Q3TCX3 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Khdc4Q3TCX3 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Khdc4Q3TCX3 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.47■□□□□ 0.39
Khdc4Q3TCX3 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Khdc4Q3TCX3 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.47■□□□□ 0.39
Khdc4Q3TCX3 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Khdc4Q3TCX3 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Khdc4Q3TCX3 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Khdc4Q3TCX3 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Khdc4Q3TCX3 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.46■□□□□ 0.39
Khdc4Q3TCX3 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Khdc4Q3TCX3 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Khdc4Q3TCX3 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Khdc4Q3TCX3 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
Khdc4Q3TCX3 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Khdc4Q3TCX3 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.46■□□□□ 0.39
Khdc4Q3TCX3 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Khdc4Q3TCX3 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Khdc4Q3TCX3 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Khdc4Q3TCX3 Gm37856-201ENSMUST00000191634 999 ntBASIC17.46■□□□□ 0.39
Khdc4Q3TCX3 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Khdc4Q3TCX3 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Khdc4Q3TCX3 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Khdc4Q3TCX3 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Khdc4Q3TCX3 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Khdc4Q3TCX3 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Khdc4Q3TCX3 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.46■□□□□ 0.39
Khdc4Q3TCX3 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.46■□□□□ 0.38
Khdc4Q3TCX3 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Khdc4Q3TCX3 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Khdc4Q3TCX3 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Khdc4Q3TCX3 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Khdc4Q3TCX3 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Khdc4Q3TCX3 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Khdc4Q3TCX3 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Khdc4Q3TCX3 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Khdc4Q3TCX3 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Khdc4Q3TCX3 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Khdc4Q3TCX3 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Khdc4Q3TCX3 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Khdc4Q3TCX3 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Khdc4Q3TCX3 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Khdc4Q3TCX3 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Khdc4Q3TCX3 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Khdc4Q3TCX3 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Khdc4Q3TCX3 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Khdc4Q3TCX3 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.44■□□□□ 0.38
Khdc4Q3TCX3 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Khdc4Q3TCX3 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Khdc4Q3TCX3 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Khdc4Q3TCX3 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.44■□□□□ 0.38
Khdc4Q3TCX3 Gm10252-201ENSMUST00000209541 832 ntBASIC17.44■□□□□ 0.38
Khdc4Q3TCX3 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
Khdc4Q3TCX3 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Khdc4Q3TCX3 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Khdc4Q3TCX3 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Khdc4Q3TCX3 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
Khdc4Q3TCX3 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Khdc4Q3TCX3 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Khdc4Q3TCX3 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Khdc4Q3TCX3 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Khdc4Q3TCX3 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.43■□□□□ 0.38
Khdc4Q3TCX3 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
Khdc4Q3TCX3 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Khdc4Q3TCX3 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
Khdc4Q3TCX3 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Khdc4Q3TCX3 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Khdc4Q3TCX3 Trmt13-210ENSMUST00000198454 880 ntBASIC17.43■□□□□ 0.38
Khdc4Q3TCX3 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
Khdc4Q3TCX3 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Khdc4Q3TCX3 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Khdc4Q3TCX3 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Khdc4Q3TCX3 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Khdc4Q3TCX3 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Khdc4Q3TCX3 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Khdc4Q3TCX3 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.43■□□□□ 0.38
Khdc4Q3TCX3 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Khdc4Q3TCX3 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Khdc4Q3TCX3 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Khdc4Q3TCX3 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Khdc4Q3TCX3 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Khdc4Q3TCX3 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Khdc4Q3TCX3 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.42■□□□□ 0.38
Khdc4Q3TCX3 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Khdc4Q3TCX3 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Khdc4Q3TCX3 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Khdc4Q3TCX3 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Khdc4Q3TCX3 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Khdc4Q3TCX3 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.42■□□□□ 0.38
Khdc4Q3TCX3 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.42■□□□□ 0.38
Khdc4Q3TCX3 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Khdc4Q3TCX3 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Khdc4Q3TCX3 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms