Protein–RNA interactions for Protein: Q2EG98

Pkd1l3, Polycystic kidney disease protein 1-like 3, mousemouse

Predictions only

Length 2,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1l3Q2EG98 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pkd1l3Q2EG98 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pkd1l3Q2EG98 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pkd1l3Q2EG98 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.51■□□□□ 0.23
Pkd1l3Q2EG98 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pkd1l3Q2EG98 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pkd1l3Q2EG98 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pkd1l3Q2EG98 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pkd1l3Q2EG98 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pkd1l3Q2EG98 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pkd1l3Q2EG98 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pkd1l3Q2EG98 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.5■□□□□ 0.23
Pkd1l3Q2EG98 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pkd1l3Q2EG98 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pkd1l3Q2EG98 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Pkd1l3Q2EG98 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.5■□□□□ 0.23
Pkd1l3Q2EG98 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pkd1l3Q2EG98 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pkd1l3Q2EG98 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.5■□□□□ 0.23
Pkd1l3Q2EG98 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Pkd1l3Q2EG98 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Pkd1l3Q2EG98 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Pkd1l3Q2EG98 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.5■□□□□ 0.23
Pkd1l3Q2EG98 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pkd1l3Q2EG98 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pkd1l3Q2EG98 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pkd1l3Q2EG98 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pkd1l3Q2EG98 Gm22325-201ENSMUST00000158904 308 ntBASIC16.5■□□□□ 0.23
Pkd1l3Q2EG98 Gm10698-201ENSMUST00000182663 604 ntBASIC16.5■□□□□ 0.23
Pkd1l3Q2EG98 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Pkd1l3Q2EG98 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pkd1l3Q2EG98 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pkd1l3Q2EG98 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pkd1l3Q2EG98 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pkd1l3Q2EG98 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Pkd1l3Q2EG98 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.49■□□□□ 0.23
Pkd1l3Q2EG98 Mir6982-201ENSMUST00000184354 68 ntBASIC16.49■□□□□ 0.23
Pkd1l3Q2EG98 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Pkd1l3Q2EG98 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pkd1l3Q2EG98 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pkd1l3Q2EG98 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pkd1l3Q2EG98 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.49■□□□□ 0.23
Pkd1l3Q2EG98 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pkd1l3Q2EG98 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Pkd1l3Q2EG98 Iqck-206ENSMUST00000208658 2891 ntBASIC16.49■□□□□ 0.23
Pkd1l3Q2EG98 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.49■□□□□ 0.23
Pkd1l3Q2EG98 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.49■□□□□ 0.23
Pkd1l3Q2EG98 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pkd1l3Q2EG98 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Pkd1l3Q2EG98 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pkd1l3Q2EG98 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pkd1l3Q2EG98 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pkd1l3Q2EG98 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pkd1l3Q2EG98 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pkd1l3Q2EG98 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pkd1l3Q2EG98 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pkd1l3Q2EG98 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pkd1l3Q2EG98 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pkd1l3Q2EG98 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pkd1l3Q2EG98 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.47■□□□□ 0.23
Pkd1l3Q2EG98 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.47■□□□□ 0.23
Pkd1l3Q2EG98 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pkd1l3Q2EG98 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.47■□□□□ 0.23
Pkd1l3Q2EG98 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Pkd1l3Q2EG98 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.47■□□□□ 0.23
Pkd1l3Q2EG98 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.47■□□□□ 0.23
Pkd1l3Q2EG98 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pkd1l3Q2EG98 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pkd1l3Q2EG98 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pkd1l3Q2EG98 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pkd1l3Q2EG98 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
Pkd1l3Q2EG98 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Pkd1l3Q2EG98 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pkd1l3Q2EG98 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pkd1l3Q2EG98 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pkd1l3Q2EG98 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.46■□□□□ 0.23
Pkd1l3Q2EG98 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Pkd1l3Q2EG98 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pkd1l3Q2EG98 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pkd1l3Q2EG98 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pkd1l3Q2EG98 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pkd1l3Q2EG98 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.46■□□□□ 0.23
Pkd1l3Q2EG98 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Pkd1l3Q2EG98 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pkd1l3Q2EG98 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.46■□□□□ 0.23
Pkd1l3Q2EG98 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.46■□□□□ 0.23
Pkd1l3Q2EG98 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pkd1l3Q2EG98 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pkd1l3Q2EG98 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pkd1l3Q2EG98 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Pkd1l3Q2EG98 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pkd1l3Q2EG98 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pkd1l3Q2EG98 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pkd1l3Q2EG98 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pkd1l3Q2EG98 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pkd1l3Q2EG98 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pkd1l3Q2EG98 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pkd1l3Q2EG98 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Pkd1l3Q2EG98 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pkd1l3Q2EG98 Gm15378-201ENSMUST00000121894 207 ntBASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms