Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC23.36■■□□□ 1.33
Nkx2-3P97334 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
Nkx2-3P97334 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
Nkx2-3P97334 Gm21814-202ENSMUST00000203277 873 ntBASIC23.36■■□□□ 1.33
Nkx2-3P97334 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC23.36■■□□□ 1.33
Nkx2-3P97334 Gm10138-203ENSMUST00000206952 366 ntBASIC23.36■■□□□ 1.33
Nkx2-3P97334 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Nkx2-3P97334 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
Nkx2-3P97334 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC23.36■■□□□ 1.33
Nkx2-3P97334 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Nkx2-3P97334 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Nkx2-3P97334 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Nkx2-3P97334 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Nkx2-3P97334 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
Nkx2-3P97334 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Nkx2-3P97334 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Nkx2-3P97334 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC23.35■■□□□ 1.33
Nkx2-3P97334 Gm15375-201ENSMUST00000119510 849 ntBASIC23.35■■□□□ 1.33
Nkx2-3P97334 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC23.35■■□□□ 1.33
Nkx2-3P97334 Gm16042-201ENSMUST00000204813 1247 ntBASIC23.35■■□□□ 1.33
Nkx2-3P97334 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Nkx2-3P97334 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Nkx2-3P97334 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Nkx2-3P97334 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Nkx2-3P97334 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Nkx2-3P97334 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
Nkx2-3P97334 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Nkx2-3P97334 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
Nkx2-3P97334 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Nkx2-3P97334 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Nkx2-3P97334 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
Nkx2-3P97334 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Nkx2-3P97334 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Nkx2-3P97334 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Nkx2-3P97334 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
Nkx2-3P97334 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC23.33■■□□□ 1.33
Nkx2-3P97334 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Nkx2-3P97334 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Nkx2-3P97334 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Nkx2-3P97334 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Nkx2-3P97334 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
Nkx2-3P97334 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Nkx2-3P97334 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Nkx2-3P97334 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
Nkx2-3P97334 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Nkx2-3P97334 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Nkx2-3P97334 Gm44544-201ENSMUST00000207052 1844 ntBASIC23.33■■□□□ 1.32
Nkx2-3P97334 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC23.33■■□□□ 1.32
Nkx2-3P97334 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
Nkx2-3P97334 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Nkx2-3P97334 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC23.32■■□□□ 1.32
Nkx2-3P97334 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Nkx2-3P97334 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC23.32■■□□□ 1.32
Nkx2-3P97334 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Nkx2-3P97334 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Nkx2-3P97334 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Nkx2-3P97334 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Nkx2-3P97334 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Nkx2-3P97334 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Nkx2-3P97334 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Nkx2-3P97334 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Nkx2-3P97334 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Nkx2-3P97334 Gm10231-201ENSMUST00000181584 441 ntBASIC23.31■■□□□ 1.32
Nkx2-3P97334 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Nkx2-3P97334 Gm10175-202ENSMUST00000208752 441 ntBASIC23.31■■□□□ 1.32
Nkx2-3P97334 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC23.31■■□□□ 1.32
Nkx2-3P97334 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC23.31■■□□□ 1.32
Nkx2-3P97334 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Nkx2-3P97334 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Nkx2-3P97334 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Nkx2-3P97334 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
Nkx2-3P97334 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.31■■□□□ 1.32
Nkx2-3P97334 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
Nkx2-3P97334 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Nkx2-3P97334 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
Nkx2-3P97334 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC23.3■■□□□ 1.32
Nkx2-3P97334 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC23.3■■□□□ 1.32
Nkx2-3P97334 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Nkx2-3P97334 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Nkx2-3P97334 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC23.3■■□□□ 1.32
Nkx2-3P97334 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Nkx2-3P97334 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC23.3■■□□□ 1.32
Nkx2-3P97334 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Nkx2-3P97334 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Nkx2-3P97334 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Nkx2-3P97334 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Nkx2-3P97334 Gm10654-201ENSMUST00000098653 1633 ntBASIC23.3■■□□□ 1.32
Nkx2-3P97334 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
Nkx2-3P97334 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Nkx2-3P97334 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
Nkx2-3P97334 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
Nkx2-3P97334 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Nkx2-3P97334 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Nkx2-3P97334 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Nkx2-3P97334 Gm11643-201ENSMUST00000119578 864 ntBASIC23.28■■□□□ 1.32
Nkx2-3P97334 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Nkx2-3P97334 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Nkx2-3P97334 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Nkx2-3P97334 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Nkx2-3P97334 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC23.27■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms