Protein–RNA interactions for Protein: P85442

Vgll3, Transcription cofactor vestigial-like protein 3, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vgll3P85442 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vgll3P85442 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vgll3P85442 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
Vgll3P85442 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
Vgll3P85442 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.81■□□□□ 0.6
Vgll3P85442 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.81■□□□□ 0.6
Vgll3P85442 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
Vgll3P85442 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vgll3P85442 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vgll3P85442 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Vgll3P85442 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vgll3P85442 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Vgll3P85442 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vgll3P85442 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Vgll3P85442 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vgll3P85442 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vgll3P85442 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.81■□□□□ 0.6
Vgll3P85442 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vgll3P85442 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vgll3P85442 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vgll3P85442 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vgll3P85442 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Vgll3P85442 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vgll3P85442 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vgll3P85442 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vgll3P85442 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.8■□□□□ 0.6
Vgll3P85442 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Vgll3P85442 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Vgll3P85442 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vgll3P85442 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vgll3P85442 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vgll3P85442 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Vgll3P85442 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Vgll3P85442 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Vgll3P85442 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vgll3P85442 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vgll3P85442 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Vgll3P85442 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vgll3P85442 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Vgll3P85442 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vgll3P85442 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Vgll3P85442 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC18.79■□□□□ 0.6
Vgll3P85442 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vgll3P85442 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Vgll3P85442 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vgll3P85442 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vgll3P85442 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.79■□□□□ 0.6
Vgll3P85442 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vgll3P85442 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vgll3P85442 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Vgll3P85442 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vgll3P85442 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vgll3P85442 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Vgll3P85442 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Vgll3P85442 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vgll3P85442 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Vgll3P85442 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vgll3P85442 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Vgll3P85442 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vgll3P85442 Rubie-203ENSMUST00000227803 2430 ntBASIC18.78■□□□□ 0.6
Vgll3P85442 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vgll3P85442 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Vgll3P85442 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.78■□□□□ 0.6
Vgll3P85442 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vgll3P85442 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Vgll3P85442 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vgll3P85442 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.78■□□□□ 0.6
Vgll3P85442 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vgll3P85442 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vgll3P85442 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vgll3P85442 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.77■□□□□ 0.6
Vgll3P85442 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vgll3P85442 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vgll3P85442 Terc-201ENSMUST00000082862 423 ntBASIC18.77■□□□□ 0.6
Vgll3P85442 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vgll3P85442 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vgll3P85442 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
Vgll3P85442 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vgll3P85442 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Vgll3P85442 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Vgll3P85442 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Vgll3P85442 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Vgll3P85442 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Vgll3P85442 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Vgll3P85442 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vgll3P85442 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vgll3P85442 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Vgll3P85442 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Vgll3P85442 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vgll3P85442 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vgll3P85442 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Vgll3P85442 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vgll3P85442 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
Vgll3P85442 Gm27502-201ENSMUST00000183495 199 ntBASIC18.76■□□□□ 0.59
Vgll3P85442 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC18.76■□□□□ 0.59
Vgll3P85442 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Vgll3P85442 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vgll3P85442 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Vgll3P85442 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vgll3P85442 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms