Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SgcdP82347 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SgcdP82347 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SgcdP82347 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SgcdP82347 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SgcdP82347 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.01■□□□□ 0.31
SgcdP82347 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.01■□□□□ 0.31
SgcdP82347 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SgcdP82347 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.01■□□□□ 0.31
SgcdP82347 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.01■□□□□ 0.31
SgcdP82347 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SgcdP82347 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SgcdP82347 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SgcdP82347 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SgcdP82347 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SgcdP82347 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.01■□□□□ 0.31
SgcdP82347 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SgcdP82347 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SgcdP82347 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SgcdP82347 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SgcdP82347 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SgcdP82347 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SgcdP82347 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SgcdP82347 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SgcdP82347 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SgcdP82347 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SgcdP82347 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SgcdP82347 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17■□□□□ 0.31
SgcdP82347 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SgcdP82347 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17■□□□□ 0.31
SgcdP82347 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17■□□□□ 0.31
SgcdP82347 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SgcdP82347 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SgcdP82347 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SgcdP82347 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SgcdP82347 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SgcdP82347 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17■□□□□ 0.31
SgcdP82347 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
SgcdP82347 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SgcdP82347 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
SgcdP82347 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SgcdP82347 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SgcdP82347 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SgcdP82347 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SgcdP82347 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SgcdP82347 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SgcdP82347 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SgcdP82347 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SgcdP82347 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SgcdP82347 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SgcdP82347 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
SgcdP82347 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
SgcdP82347 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SgcdP82347 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SgcdP82347 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SgcdP82347 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SgcdP82347 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SgcdP82347 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SgcdP82347 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SgcdP82347 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.98■□□□□ 0.31
SgcdP82347 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.98■□□□□ 0.31
SgcdP82347 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SgcdP82347 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SgcdP82347 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SgcdP82347 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SgcdP82347 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SgcdP82347 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SgcdP82347 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SgcdP82347 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
SgcdP82347 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
SgcdP82347 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SgcdP82347 Gm5576-201ENSMUST00000075809 1236 ntBASIC16.98■□□□□ 0.31
SgcdP82347 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SgcdP82347 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SgcdP82347 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SgcdP82347 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
SgcdP82347 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.98■□□□□ 0.31
SgcdP82347 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SgcdP82347 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SgcdP82347 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SgcdP82347 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SgcdP82347 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SgcdP82347 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SgcdP82347 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SgcdP82347 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC16.97■□□□□ 0.31
SgcdP82347 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SgcdP82347 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SgcdP82347 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SgcdP82347 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.97■□□□□ 0.31
SgcdP82347 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SgcdP82347 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
SgcdP82347 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
SgcdP82347 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC16.96■□□□□ 0.31
SgcdP82347 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SgcdP82347 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SgcdP82347 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SgcdP82347 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SgcdP82347 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SgcdP82347 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SgcdP82347 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms