Protein–RNA interactions for Protein: P70343

Casp4, Caspase-4, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casp4P70343 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Casp4P70343 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Casp4P70343 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Casp4P70343 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Casp4P70343 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Casp4P70343 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.24■□□□□ 0.67
Casp4P70343 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Casp4P70343 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Casp4P70343 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Casp4P70343 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Casp4P70343 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Casp4P70343 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Casp4P70343 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Casp4P70343 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Casp4P70343 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.23■□□□□ 0.67
Casp4P70343 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Casp4P70343 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Casp4P70343 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Casp4P70343 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.23■□□□□ 0.67
Casp4P70343 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Casp4P70343 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Casp4P70343 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Casp4P70343 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.23■□□□□ 0.67
Casp4P70343 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Casp4P70343 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Casp4P70343 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Casp4P70343 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Casp4P70343 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Casp4P70343 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Casp4P70343 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Casp4P70343 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Casp4P70343 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Casp4P70343 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.22■□□□□ 0.67
Casp4P70343 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Casp4P70343 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Casp4P70343 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.22■□□□□ 0.67
Casp4P70343 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Casp4P70343 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Casp4P70343 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Casp4P70343 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Casp4P70343 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Casp4P70343 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Casp4P70343 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Casp4P70343 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Casp4P70343 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Casp4P70343 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Casp4P70343 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Casp4P70343 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.21■□□□□ 0.67
Casp4P70343 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Casp4P70343 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Casp4P70343 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Casp4P70343 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Casp4P70343 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Casp4P70343 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Casp4P70343 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Casp4P70343 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Casp4P70343 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Casp4P70343 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Casp4P70343 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Casp4P70343 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Casp4P70343 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Casp4P70343 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Casp4P70343 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.2■□□□□ 0.66
Casp4P70343 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Casp4P70343 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Casp4P70343 Gm43548-201ENSMUST00000197139 2353 ntBASIC19.19■□□□□ 0.66
Casp4P70343 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Casp4P70343 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Casp4P70343 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Casp4P70343 Gm13146-201ENSMUST00000118508 780 ntBASIC19.19■□□□□ 0.66
Casp4P70343 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Casp4P70343 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Casp4P70343 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.19■□□□□ 0.66
Casp4P70343 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Casp4P70343 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Casp4P70343 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Casp4P70343 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Casp4P70343 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Casp4P70343 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.19■□□□□ 0.66
Casp4P70343 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Casp4P70343 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Casp4P70343 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Casp4P70343 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Casp4P70343 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Casp4P70343 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Casp4P70343 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Casp4P70343 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Casp4P70343 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.18■□□□□ 0.66
Casp4P70343 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Casp4P70343 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Casp4P70343 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.18■□□□□ 0.66
Casp4P70343 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Casp4P70343 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Casp4P70343 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Casp4P70343 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Casp4P70343 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.17■□□□□ 0.66
Casp4P70343 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Casp4P70343 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Casp4P70343 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Casp4P70343 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms