Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Pdlim4P70271 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pdlim4P70271 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Pdlim4P70271 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pdlim4P70271 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Pdlim4P70271 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Pdlim4P70271 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pdlim4P70271 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Pdlim4P70271 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pdlim4P70271 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pdlim4P70271 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Pdlim4P70271 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pdlim4P70271 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pdlim4P70271 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pdlim4P70271 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pdlim4P70271 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Pdlim4P70271 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC15.26■□□□□ 0.03
Pdlim4P70271 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pdlim4P70271 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Pdlim4P70271 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pdlim4P70271 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pdlim4P70271 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Pdlim4P70271 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pdlim4P70271 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pdlim4P70271 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pdlim4P70271 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pdlim4P70271 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pdlim4P70271 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pdlim4P70271 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pdlim4P70271 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pdlim4P70271 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Pdlim4P70271 Gm10461-201ENSMUST00000202073 4786 ntBASIC15.25■□□□□ 0.03
Pdlim4P70271 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pdlim4P70271 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pdlim4P70271 Gm37179-201ENSMUST00000194862 823 ntBASIC15.25■□□□□ 0.03
Pdlim4P70271 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC15.25■□□□□ 0.03
Pdlim4P70271 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pdlim4P70271 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pdlim4P70271 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pdlim4P70271 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pdlim4P70271 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pdlim4P70271 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pdlim4P70271 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pdlim4P70271 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pdlim4P70271 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.25■□□□□ 0.03
Pdlim4P70271 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pdlim4P70271 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pdlim4P70271 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pdlim4P70271 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pdlim4P70271 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Pdlim4P70271 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pdlim4P70271 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC15.24■□□□□ 0.03
Pdlim4P70271 Gm19094-201ENSMUST00000209791 1246 ntBASIC15.24■□□□□ 0.03
Pdlim4P70271 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pdlim4P70271 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pdlim4P70271 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pdlim4P70271 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pdlim4P70271 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC15.24■□□□□ 0.03
Pdlim4P70271 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC15.24■□□□□ 0.03
Pdlim4P70271 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Pdlim4P70271 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pdlim4P70271 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Pdlim4P70271 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pdlim4P70271 AC131586.2-201ENSMUST00000228370 1512 ntBASIC15.23■□□□□ 0.03
Pdlim4P70271 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pdlim4P70271 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Pdlim4P70271 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pdlim4P70271 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pdlim4P70271 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC15.23■□□□□ 0.03
Pdlim4P70271 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pdlim4P70271 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Pdlim4P70271 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pdlim4P70271 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pdlim4P70271 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pdlim4P70271 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Pdlim4P70271 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pdlim4P70271 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pdlim4P70271 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC15.23■□□□□ 0.03
Pdlim4P70271 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pdlim4P70271 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Pdlim4P70271 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pdlim4P70271 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pdlim4P70271 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Pdlim4P70271 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Pdlim4P70271 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC15.22■□□□□ 0.03
Pdlim4P70271 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pdlim4P70271 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC15.22■□□□□ 0.03
Pdlim4P70271 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pdlim4P70271 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pdlim4P70271 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Pdlim4P70271 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pdlim4P70271 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pdlim4P70271 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pdlim4P70271 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pdlim4P70271 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pdlim4P70271 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Pdlim4P70271 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC15.22■□□□□ 0.03
Pdlim4P70271 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pdlim4P70271 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pdlim4P70271 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms