Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.56■□□□□ 0.56
ThraP63058 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ThraP63058 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ThraP63058 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ThraP63058 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ThraP63058 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ThraP63058 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ThraP63058 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ThraP63058 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ThraP63058 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ThraP63058 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.55■□□□□ 0.56
ThraP63058 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ThraP63058 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.55■□□□□ 0.56
ThraP63058 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ThraP63058 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.55■□□□□ 0.56
ThraP63058 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ThraP63058 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ThraP63058 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.55■□□□□ 0.56
ThraP63058 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ThraP63058 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
ThraP63058 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ThraP63058 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ThraP63058 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
ThraP63058 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ThraP63058 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ThraP63058 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
ThraP63058 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
ThraP63058 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ThraP63058 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.54■□□□□ 0.56
ThraP63058 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ThraP63058 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ThraP63058 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ThraP63058 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ThraP63058 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ThraP63058 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.54■□□□□ 0.56
ThraP63058 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ThraP63058 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ThraP63058 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ThraP63058 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
ThraP63058 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
ThraP63058 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ThraP63058 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ThraP63058 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.54■□□□□ 0.56
ThraP63058 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ThraP63058 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.53■□□□□ 0.56
ThraP63058 Gm7290-201ENSMUST00000104990 617 ntBASIC18.53■□□□□ 0.56
ThraP63058 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ThraP63058 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.53■□□□□ 0.56
ThraP63058 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
ThraP63058 Gm12918-201ENSMUST00000120234 636 ntBASIC18.53■□□□□ 0.56
ThraP63058 Gm13534-201ENSMUST00000121169 513 ntBASIC18.53■□□□□ 0.56
ThraP63058 Gm15710-201ENSMUST00000121821 636 ntBASIC18.53■□□□□ 0.56
ThraP63058 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.53■□□□□ 0.56
ThraP63058 Gm5075-201ENSMUST00000196916 622 ntBASIC18.53■□□□□ 0.56
ThraP63058 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.53■□□□□ 0.56
ThraP63058 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.53■□□□□ 0.56
ThraP63058 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.53■□□□□ 0.56
ThraP63058 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.53■□□□□ 0.56
ThraP63058 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ThraP63058 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ThraP63058 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.53■□□□□ 0.56
ThraP63058 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ThraP63058 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ThraP63058 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ThraP63058 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ThraP63058 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ThraP63058 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ThraP63058 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
ThraP63058 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ThraP63058 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ThraP63058 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
ThraP63058 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
ThraP63058 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.52■□□□□ 0.56
ThraP63058 Gm6420-201ENSMUST00000193885 723 ntBASIC18.52■□□□□ 0.56
ThraP63058 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ThraP63058 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.52■□□□□ 0.56
ThraP63058 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ThraP63058 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ThraP63058 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
ThraP63058 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ThraP63058 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ThraP63058 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ThraP63058 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ThraP63058 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
ThraP63058 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ThraP63058 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.52■□□□□ 0.55
ThraP63058 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
ThraP63058 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
ThraP63058 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
ThraP63058 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ThraP63058 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ThraP63058 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.51■□□□□ 0.55
ThraP63058 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ThraP63058 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ThraP63058 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ThraP63058 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ThraP63058 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ThraP63058 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ThraP63058 Gm13148-201ENSMUST00000118892 745 ntBASIC18.51■□□□□ 0.55
ThraP63058 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms