Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Rpl39P62892 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rpl39P62892 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rpl39P62892 Fst-202ENSMUST00000223640 2612 ntBASIC13.12□□□□□ -0.31
Rpl39P62892 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rpl39P62892 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rpl39P62892 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rpl39P62892 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rpl39P62892 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rpl39P62892 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rpl39P62892 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rpl39P62892 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rpl39P62892 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC13.12□□□□□ -0.31
Rpl39P62892 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rpl39P62892 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC13.12□□□□□ -0.31
Rpl39P62892 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rpl39P62892 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rpl39P62892 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rpl39P62892 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rpl39P62892 Gm5828-201ENSMUST00000071842 1860 ntBASIC13.12□□□□□ -0.31
Rpl39P62892 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rpl39P62892 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rpl39P62892 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rpl39P62892 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rpl39P62892 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rpl39P62892 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Rpl39P62892 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rpl39P62892 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rpl39P62892 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rpl39P62892 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Rpl39P62892 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rpl39P62892 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC13.11□□□□□ -0.31
Rpl39P62892 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rpl39P62892 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rpl39P62892 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC13.11□□□□□ -0.31
Rpl39P62892 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC13.11□□□□□ -0.31
Rpl39P62892 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rpl39P62892 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC13.11□□□□□ -0.31
Rpl39P62892 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rpl39P62892 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Rpl39P62892 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rpl39P62892 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rpl39P62892 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rpl39P62892 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rpl39P62892 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rpl39P62892 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rpl39P62892 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rpl39P62892 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rpl39P62892 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rpl39P62892 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rpl39P62892 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rpl39P62892 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rpl39P62892 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rpl39P62892 Gm5522-201ENSMUST00000189483 1242 ntBASIC13.1□□□□□ -0.31
Rpl39P62892 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rpl39P62892 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rpl39P62892 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rpl39P62892 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rpl39P62892 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rpl39P62892 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rpl39P62892 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Rpl39P62892 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rpl39P62892 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rpl39P62892 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rpl39P62892 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rpl39P62892 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC13.1□□□□□ -0.31
Rpl39P62892 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rpl39P62892 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rpl39P62892 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rpl39P62892 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rpl39P62892 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rpl39P62892 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC13.09□□□□□ -0.31
Rpl39P62892 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rpl39P62892 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC13.09□□□□□ -0.31
Rpl39P62892 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rpl39P62892 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Rpl39P62892 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Rpl39P62892 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rpl39P62892 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rpl39P62892 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rpl39P62892 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rpl39P62892 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rpl39P62892 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Rpl39P62892 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rpl39P62892 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rpl39P62892 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Rpl39P62892 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Rpl39P62892 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Rpl39P62892 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rpl39P62892 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rpl39P62892 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Rpl39P62892 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rpl39P62892 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rpl39P62892 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Rpl39P62892 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC13.08□□□□□ -0.32
Rpl39P62892 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rpl39P62892 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rpl39P62892 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC13.08□□□□□ -0.32
Rpl39P62892 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rpl39P62892 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms