Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm3P62311 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm3P62311 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm3P62311 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC16.82■□□□□ 0.28
Lsm3P62311 Gm12366-201ENSMUST00000121722 873 ntBASIC16.82■□□□□ 0.28
Lsm3P62311 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm3P62311 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC16.82■□□□□ 0.28
Lsm3P62311 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC16.82■□□□□ 0.28
Lsm3P62311 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC16.82■□□□□ 0.28
Lsm3P62311 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC16.82■□□□□ 0.28
Lsm3P62311 Gm5786-201ENSMUST00000085368 882 ntBASIC16.82■□□□□ 0.28
Lsm3P62311 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm3P62311 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm3P62311 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Lsm3P62311 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm3P62311 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm3P62311 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
Lsm3P62311 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm3P62311 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.81■□□□□ 0.28
Lsm3P62311 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Lsm3P62311 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm3P62311 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm3P62311 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC16.81■□□□□ 0.28
Lsm3P62311 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm3P62311 Etf1-202ENSMUST00000180351 108 ntBASIC16.81■□□□□ 0.28
Lsm3P62311 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm3P62311 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm3P62311 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm3P62311 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm3P62311 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm3P62311 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm3P62311 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm3P62311 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm3P62311 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm3P62311 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm3P62311 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm3P62311 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm3P62311 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm3P62311 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm3P62311 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC16.8■□□□□ 0.28
Lsm3P62311 Gm5067-201ENSMUST00000170449 1009 ntBASIC16.8■□□□□ 0.28
Lsm3P62311 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC16.8■□□□□ 0.28
Lsm3P62311 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm3P62311 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Lsm3P62311 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm3P62311 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Lsm3P62311 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm3P62311 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm3P62311 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm3P62311 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm3P62311 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm3P62311 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm3P62311 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm3P62311 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm3P62311 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm3P62311 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm3P62311 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm3P62311 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Lsm3P62311 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm3P62311 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm3P62311 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm3P62311 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm3P62311 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm3P62311 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm3P62311 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm3P62311 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm3P62311 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm3P62311 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Lsm3P62311 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm3P62311 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm3P62311 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm3P62311 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm3P62311 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC16.78■□□□□ 0.28
Lsm3P62311 Gm45444-201ENSMUST00000211394 898 ntBASIC16.78■□□□□ 0.28
Lsm3P62311 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm3P62311 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm3P62311 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm3P62311 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm3P62311 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm3P62311 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Lsm3P62311 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm3P62311 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lsm3P62311 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lsm3P62311 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC16.77■□□□□ 0.28
Lsm3P62311 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lsm3P62311 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Lsm3P62311 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lsm3P62311 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lsm3P62311 Gm11175-201ENSMUST00000116172 543 ntBASIC16.77■□□□□ 0.28
Lsm3P62311 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC16.77■□□□□ 0.28
Lsm3P62311 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Lsm3P62311 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Lsm3P62311 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Lsm3P62311 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Lsm3P62311 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lsm3P62311 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Lsm3P62311 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lsm3P62311 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lsm3P62311 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Lsm3P62311 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms