Protein–RNA interactions for Protein: P59114

Pcif1, Phosphorylated CTD-interacting factor 1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1P59114 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.65■□□□□ 0.9
Pcif1P59114 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcif1P59114 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pcif1P59114 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.65■□□□□ 0.9
Pcif1P59114 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.65■□□□□ 0.9
Pcif1P59114 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.65■□□□□ 0.9
Pcif1P59114 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.65■□□□□ 0.9
Pcif1P59114 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC20.65■□□□□ 0.9
Pcif1P59114 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC20.65■□□□□ 0.9
Pcif1P59114 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
Pcif1P59114 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcif1P59114 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.65■□□□□ 0.9
Pcif1P59114 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcif1P59114 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pcif1P59114 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pcif1P59114 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC20.64■□□□□ 0.9
Pcif1P59114 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC20.64■□□□□ 0.9
Pcif1P59114 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Pcif1P59114 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Pcif1P59114 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.64■□□□□ 0.89
Pcif1P59114 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcif1P59114 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Pcif1P59114 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcif1P59114 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcif1P59114 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Pcif1P59114 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcif1P59114 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcif1P59114 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.64■□□□□ 0.89
Pcif1P59114 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcif1P59114 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Pcif1P59114 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcif1P59114 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcif1P59114 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pcif1P59114 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Pcif1P59114 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.63■□□□□ 0.89
Pcif1P59114 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcif1P59114 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Pcif1P59114 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcif1P59114 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcif1P59114 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.62■□□□□ 0.89
Pcif1P59114 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcif1P59114 Gm12527-201ENSMUST00000117967 564 ntBASIC20.62■□□□□ 0.89
Pcif1P59114 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pcif1P59114 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pcif1P59114 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcif1P59114 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcif1P59114 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Pcif1P59114 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcif1P59114 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pcif1P59114 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcif1P59114 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcif1P59114 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
Pcif1P59114 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pcif1P59114 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Pcif1P59114 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcif1P59114 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20.61■□□□□ 0.89
Pcif1P59114 Gm27011-201ENSMUST00000182352 972 ntBASIC20.61■□□□□ 0.89
Pcif1P59114 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcif1P59114 Gm44549-201ENSMUST00000208351 577 ntBASIC20.61■□□□□ 0.89
Pcif1P59114 AC107452.1-201ENSMUST00000227963 481 ntBASIC20.61■□□□□ 0.89
Pcif1P59114 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcif1P59114 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Pcif1P59114 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Pcif1P59114 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcif1P59114 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Pcif1P59114 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcif1P59114 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pcif1P59114 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcif1P59114 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
Pcif1P59114 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Pcif1P59114 Gm20049-201ENSMUST00000219950 730 ntBASIC20.6■□□□□ 0.89
Pcif1P59114 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.6■□□□□ 0.89
Pcif1P59114 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcif1P59114 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcif1P59114 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
Pcif1P59114 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Pcif1P59114 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcif1P59114 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcif1P59114 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcif1P59114 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pcif1P59114 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcif1P59114 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Pcif1P59114 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pcif1P59114 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pcif1P59114 AC140264.2-202ENSMUST00000218746 817 ntBASIC20.59■□□□□ 0.89
Pcif1P59114 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC20.59■□□□□ 0.89
Pcif1P59114 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC20.59■□□□□ 0.89
Pcif1P59114 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcif1P59114 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcif1P59114 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcif1P59114 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Pcif1P59114 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcif1P59114 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Pcif1P59114 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcif1P59114 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.58■□□□□ 0.89
Pcif1P59114 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.58■□□□□ 0.89
Pcif1P59114 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcif1P59114 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcif1P59114 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Pcif1P59114 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms