Protein–RNA interactions for Protein: P57080

Usp25, Ubiquitin carboxyl-terminal hydrolase 25, mousemouse

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp25P57080 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp25P57080 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Usp25P57080 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp25P57080 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp25P57080 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC20.78■□□□□ 0.92
Usp25P57080 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp25P57080 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.78■□□□□ 0.92
Usp25P57080 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.78■□□□□ 0.92
Usp25P57080 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp25P57080 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp25P57080 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC20.78■□□□□ 0.92
Usp25P57080 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Usp25P57080 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Usp25P57080 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp25P57080 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp25P57080 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp25P57080 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp25P57080 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Usp25P57080 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Usp25P57080 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Usp25P57080 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Usp25P57080 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
Usp25P57080 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Usp25P57080 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.77■□□□□ 0.92
Usp25P57080 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.77■□□□□ 0.92
Usp25P57080 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.77■□□□□ 0.92
Usp25P57080 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
Usp25P57080 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp25P57080 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp25P57080 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp25P57080 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp25P57080 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp25P57080 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Usp25P57080 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Usp25P57080 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Usp25P57080 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC20.76■□□□□ 0.91
Usp25P57080 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp25P57080 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Usp25P57080 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp25P57080 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Usp25P57080 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp25P57080 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp25P57080 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp25P57080 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp25P57080 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Usp25P57080 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp25P57080 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.76■□□□□ 0.91
Usp25P57080 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp25P57080 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Usp25P57080 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp25P57080 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp25P57080 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Usp25P57080 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC20.76■□□□□ 0.91
Usp25P57080 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Usp25P57080 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Usp25P57080 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp25P57080 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Usp25P57080 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp25P57080 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp25P57080 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Usp25P57080 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.75■□□□□ 0.91
Usp25P57080 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp25P57080 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp25P57080 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Usp25P57080 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp25P57080 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp25P57080 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp25P57080 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp25P57080 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp25P57080 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Usp25P57080 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp25P57080 Gm38308-201ENSMUST00000194934 1809 ntBASIC20.74■□□□□ 0.91
Usp25P57080 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp25P57080 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp25P57080 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp25P57080 Gm12251-201ENSMUST00000117893 792 ntBASIC20.74■□□□□ 0.91
Usp25P57080 Gm12821-201ENSMUST00000120022 600 ntBASIC20.74■□□□□ 0.91
Usp25P57080 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp25P57080 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC20.74■□□□□ 0.91
Usp25P57080 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Usp25P57080 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp25P57080 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp25P57080 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp25P57080 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp25P57080 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp25P57080 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC20.73■□□□□ 0.91
Usp25P57080 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp25P57080 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp25P57080 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp25P57080 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Usp25P57080 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.73■□□□□ 0.91
Usp25P57080 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.73■□□□□ 0.91
Usp25P57080 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.73■□□□□ 0.91
Usp25P57080 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp25P57080 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Usp25P57080 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC20.73■□□□□ 0.91
Usp25P57080 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp25P57080 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Usp25P57080 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp25P57080 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms