Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm43353-201ENSMUST00000199224 1295 ntBASIC19.54■□□□□ 0.72
NcanP55066 Mzt1-203ENSMUST00000227948 952 ntBASIC19.54■□□□□ 0.72
NcanP55066 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NcanP55066 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
NcanP55066 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
NcanP55066 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NcanP55066 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
NcanP55066 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NcanP55066 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NcanP55066 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NcanP55066 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NcanP55066 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
NcanP55066 Gm22697-201ENSMUST00000175194 63 ntBASIC19.53■□□□□ 0.72
NcanP55066 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC19.53■□□□□ 0.72
NcanP55066 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NcanP55066 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.53■□□□□ 0.72
NcanP55066 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC19.53■□□□□ 0.72
NcanP55066 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NcanP55066 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NcanP55066 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.53■□□□□ 0.72
NcanP55066 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NcanP55066 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NcanP55066 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NcanP55066 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NcanP55066 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
NcanP55066 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NcanP55066 Gm28033-201ENSMUST00000184224 96 ntBASIC19.52■□□□□ 0.72
NcanP55066 Umpk-ps-201ENSMUST00000211897 827 ntBASIC19.52■□□□□ 0.72
NcanP55066 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
NcanP55066 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NcanP55066 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NcanP55066 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NcanP55066 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NcanP55066 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NcanP55066 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.51■□□□□ 0.71
NcanP55066 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC19.51■□□□□ 0.71
NcanP55066 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC19.51■□□□□ 0.71
NcanP55066 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC19.51■□□□□ 0.71
NcanP55066 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.51■□□□□ 0.71
NcanP55066 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NcanP55066 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
NcanP55066 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NcanP55066 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
NcanP55066 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NcanP55066 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
NcanP55066 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
NcanP55066 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NcanP55066 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
NcanP55066 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NcanP55066 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NcanP55066 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.5■□□□□ 0.71
NcanP55066 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NcanP55066 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NcanP55066 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NcanP55066 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
NcanP55066 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
NcanP55066 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
NcanP55066 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC19.49■□□□□ 0.71
NcanP55066 Gm27463-201ENSMUST00000183569 57 ntBASIC19.49■□□□□ 0.71
NcanP55066 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC19.49■□□□□ 0.71
NcanP55066 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
NcanP55066 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NcanP55066 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NcanP55066 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NcanP55066 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NcanP55066 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NcanP55066 Gm6190-201ENSMUST00000220683 1374 ntBASIC19.48■□□□□ 0.71
NcanP55066 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.48■□□□□ 0.71
NcanP55066 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.48■□□□□ 0.71
NcanP55066 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NcanP55066 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC19.48■□□□□ 0.71
NcanP55066 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NcanP55066 Gm8258-201ENSMUST00000055593 1449 ntBASIC19.48■□□□□ 0.71
NcanP55066 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NcanP55066 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
NcanP55066 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.47■□□□□ 0.71
NcanP55066 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NcanP55066 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.47■□□□□ 0.71
NcanP55066 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NcanP55066 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC19.47■□□□□ 0.71
NcanP55066 Mir6349-201ENSMUST00000184059 97 ntBASIC19.47■□□□□ 0.71
NcanP55066 AC134329.2-201ENSMUST00000217897 428 ntBASIC19.47■□□□□ 0.71
NcanP55066 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
NcanP55066 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
NcanP55066 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NcanP55066 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
NcanP55066 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
NcanP55066 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NcanP55066 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
NcanP55066 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC19.46■□□□□ 0.71
NcanP55066 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NcanP55066 Gm2274-201ENSMUST00000184539 609 ntBASIC19.46■□□□□ 0.71
NcanP55066 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
NcanP55066 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NcanP55066 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NcanP55066 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
NcanP55066 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NcanP55066 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
NcanP55066 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NcanP55066 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms