Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
NrlP54846 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NrlP54846 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
NrlP54846 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NrlP54846 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NrlP54846 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NrlP54846 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.57■□□□□ 0.72
NrlP54846 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NrlP54846 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NrlP54846 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NrlP54846 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NrlP54846 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NrlP54846 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
NrlP54846 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC19.56■□□□□ 0.72
NrlP54846 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
NrlP54846 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.56■□□□□ 0.72
NrlP54846 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.56■□□□□ 0.72
NrlP54846 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.56■□□□□ 0.72
NrlP54846 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NrlP54846 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NrlP54846 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NrlP54846 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NrlP54846 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NrlP54846 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NrlP54846 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NrlP54846 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NrlP54846 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
NrlP54846 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NrlP54846 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC19.55■□□□□ 0.72
NrlP54846 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.55■□□□□ 0.72
NrlP54846 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NrlP54846 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NrlP54846 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
NrlP54846 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NrlP54846 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NrlP54846 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
NrlP54846 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NrlP54846 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.54■□□□□ 0.72
NrlP54846 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NrlP54846 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC19.54■□□□□ 0.72
NrlP54846 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.54■□□□□ 0.72
NrlP54846 Gm37055-201ENSMUST00000191866 133 ntBASIC19.54■□□□□ 0.72
NrlP54846 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NrlP54846 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
NrlP54846 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NrlP54846 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
NrlP54846 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NrlP54846 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
NrlP54846 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NrlP54846 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
NrlP54846 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
NrlP54846 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NrlP54846 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NrlP54846 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.53■□□□□ 0.72
NrlP54846 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC19.53■□□□□ 0.72
NrlP54846 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
NrlP54846 Gm15565-201ENSMUST00000118890 427 ntBASIC19.53■□□□□ 0.72
NrlP54846 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
NrlP54846 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NrlP54846 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NrlP54846 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NrlP54846 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NrlP54846 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
NrlP54846 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NrlP54846 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
NrlP54846 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NrlP54846 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.53■□□□□ 0.72
NrlP54846 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NrlP54846 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
NrlP54846 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NrlP54846 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
NrlP54846 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC19.52■□□□□ 0.72
NrlP54846 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NrlP54846 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC19.52■□□□□ 0.72
NrlP54846 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NrlP54846 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
NrlP54846 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NrlP54846 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NrlP54846 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NrlP54846 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
NrlP54846 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
NrlP54846 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
NrlP54846 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
NrlP54846 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.52■□□□□ 0.71
NrlP54846 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NrlP54846 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.51■□□□□ 0.71
NrlP54846 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
NrlP54846 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
NrlP54846 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC19.51■□□□□ 0.71
NrlP54846 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.51■□□□□ 0.71
NrlP54846 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19.51■□□□□ 0.71
NrlP54846 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NrlP54846 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NrlP54846 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
NrlP54846 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
NrlP54846 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NrlP54846 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
NrlP54846 Flg-201ENSMUST00000050758 1488 ntBASIC19.5■□□□□ 0.71
NrlP54846 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NrlP54846 Gm9484-201ENSMUST00000195892 1159 ntBASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms