Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nub1P54729 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Nub1P54729 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nub1P54729 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nub1P54729 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nub1P54729 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nub1P54729 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Nub1P54729 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Nub1P54729 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nub1P54729 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Nub1P54729 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nub1P54729 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Nub1P54729 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nub1P54729 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nub1P54729 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nub1P54729 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Nub1P54729 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nub1P54729 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nub1P54729 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nub1P54729 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nub1P54729 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Nub1P54729 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nub1P54729 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Nub1P54729 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Nub1P54729 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Nub1P54729 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Nub1P54729 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Nub1P54729 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nub1P54729 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19.77■□□□□ 0.76
Nub1P54729 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Nub1P54729 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Nub1P54729 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nub1P54729 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nub1P54729 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nub1P54729 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.76■□□□□ 0.75
Nub1P54729 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Nub1P54729 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nub1P54729 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nub1P54729 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nub1P54729 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.76■□□□□ 0.75
Nub1P54729 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nub1P54729 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nub1P54729 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nub1P54729 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nub1P54729 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nub1P54729 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.75■□□□□ 0.75
Nub1P54729 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nub1P54729 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nub1P54729 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nub1P54729 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.75■□□□□ 0.75
Nub1P54729 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nub1P54729 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.75■□□□□ 0.75
Nub1P54729 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.75■□□□□ 0.75
Nub1P54729 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nub1P54729 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.75■□□□□ 0.75
Nub1P54729 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nub1P54729 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nub1P54729 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nub1P54729 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nub1P54729 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nub1P54729 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nub1P54729 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nub1P54729 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.74■□□□□ 0.75
Nub1P54729 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nub1P54729 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Nub1P54729 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nub1P54729 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nub1P54729 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nub1P54729 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Nub1P54729 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nub1P54729 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
Nub1P54729 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nub1P54729 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nub1P54729 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nub1P54729 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nub1P54729 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nub1P54729 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
Nub1P54729 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Nub1P54729 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Nub1P54729 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nub1P54729 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nub1P54729 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.73■□□□□ 0.75
Nub1P54729 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Nub1P54729 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.73■□□□□ 0.75
Nub1P54729 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.73■□□□□ 0.75
Nub1P54729 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nub1P54729 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Nub1P54729 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nub1P54729 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nub1P54729 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nub1P54729 Gm7290-201ENSMUST00000104990 617 ntBASIC19.72■□□□□ 0.75
Nub1P54729 Gm13148-201ENSMUST00000118892 745 ntBASIC19.72■□□□□ 0.75
Nub1P54729 Gm12918-201ENSMUST00000120234 636 ntBASIC19.72■□□□□ 0.75
Nub1P54729 Gm15710-201ENSMUST00000121821 636 ntBASIC19.72■□□□□ 0.75
Nub1P54729 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.72■□□□□ 0.75
Nub1P54729 Gm5075-201ENSMUST00000196916 622 ntBASIC19.72■□□□□ 0.75
Nub1P54729 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nub1P54729 AC154231.1-201ENSMUST00000220564 2175 ntBASIC19.72■□□□□ 0.75
Nub1P54729 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.72■□□□□ 0.75
Nub1P54729 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms