Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sox3P53784 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sox3P53784 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sox3P53784 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Sox3P53784 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sox3P53784 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sox3P53784 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sox3P53784 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sox3P53784 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.54■□□□□ 0.4
Sox3P53784 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sox3P53784 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Sox3P53784 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sox3P53784 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Sox3P53784 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.54■□□□□ 0.4
Sox3P53784 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sox3P53784 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sox3P53784 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox3P53784 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox3P53784 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox3P53784 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox3P53784 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.53■□□□□ 0.4
Sox3P53784 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.53■□□□□ 0.4
Sox3P53784 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox3P53784 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox3P53784 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sox3P53784 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Sox3P53784 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.52■□□□□ 0.4
Sox3P53784 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sox3P53784 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sox3P53784 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Sox3P53784 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sox3P53784 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Sox3P53784 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Sox3P53784 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.52■□□□□ 0.4
Sox3P53784 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.52■□□□□ 0.4
Sox3P53784 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sox3P53784 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Sox3P53784 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sox3P53784 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
Sox3P53784 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.52■□□□□ 0.4
Sox3P53784 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Sox3P53784 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.52■□□□□ 0.4
Sox3P53784 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
Sox3P53784 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sox3P53784 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sox3P53784 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.52■□□□□ 0.39
Sox3P53784 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.39
Sox3P53784 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sox3P53784 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sox3P53784 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Sox3P53784 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sox3P53784 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.51■□□□□ 0.39
Sox3P53784 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Sox3P53784 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sox3P53784 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.51■□□□□ 0.39
Sox3P53784 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Sox3P53784 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Sox3P53784 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Sox3P53784 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.51■□□□□ 0.39
Sox3P53784 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox3P53784 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Sox3P53784 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox3P53784 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox3P53784 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox3P53784 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.51■□□□□ 0.39
Sox3P53784 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Sox3P53784 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
Sox3P53784 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox3P53784 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Sox3P53784 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Sox3P53784 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox3P53784 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox3P53784 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox3P53784 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox3P53784 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox3P53784 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox3P53784 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.5■□□□□ 0.39
Sox3P53784 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Sox3P53784 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox3P53784 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox3P53784 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox3P53784 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox3P53784 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
Sox3P53784 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox3P53784 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Sox3P53784 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sox3P53784 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sox3P53784 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sox3P53784 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sox3P53784 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sox3P53784 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.49■□□□□ 0.39
Sox3P53784 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sox3P53784 Gm12896-201ENSMUST00000118430 226 ntBASIC17.49■□□□□ 0.39
Sox3P53784 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Sox3P53784 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sox3P53784 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Sox3P53784 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Sox3P53784 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sox3P53784 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.49■□□□□ 0.39
Sox3P53784 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms