Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pdx1P52946 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pdx1P52946 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pdx1P52946 Gm7290-201ENSMUST00000104990 617 ntBASIC18.21■□□□□ 0.51
Pdx1P52946 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pdx1P52946 Gm12918-201ENSMUST00000120234 636 ntBASIC18.21■□□□□ 0.51
Pdx1P52946 Gm15710-201ENSMUST00000121821 636 ntBASIC18.21■□□□□ 0.51
Pdx1P52946 Gm6211-202ENSMUST00000167849 925 ntBASIC18.21■□□□□ 0.51
Pdx1P52946 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pdx1P52946 Gm5075-201ENSMUST00000196916 622 ntBASIC18.21■□□□□ 0.51
Pdx1P52946 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.21■□□□□ 0.51
Pdx1P52946 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.21■□□□□ 0.51
Pdx1P52946 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pdx1P52946 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pdx1P52946 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pdx1P52946 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pdx1P52946 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pdx1P52946 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pdx1P52946 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pdx1P52946 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Pdx1P52946 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.2■□□□□ 0.5
Pdx1P52946 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pdx1P52946 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pdx1P52946 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.2■□□□□ 0.5
Pdx1P52946 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.2■□□□□ 0.5
Pdx1P52946 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.2■□□□□ 0.5
Pdx1P52946 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.2■□□□□ 0.5
Pdx1P52946 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pdx1P52946 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pdx1P52946 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pdx1P52946 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pdx1P52946 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.2■□□□□ 0.5
Pdx1P52946 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pdx1P52946 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.19■□□□□ 0.5
Pdx1P52946 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pdx1P52946 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Pdx1P52946 Mir5133-201ENSMUST00000174955 77 ntBASIC18.19■□□□□ 0.5
Pdx1P52946 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pdx1P52946 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pdx1P52946 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pdx1P52946 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pdx1P52946 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pdx1P52946 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pdx1P52946 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pdx1P52946 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
Pdx1P52946 Gm12933-201ENSMUST00000120203 872 ntBASIC18.18■□□□□ 0.5
Pdx1P52946 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Pdx1P52946 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pdx1P52946 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pdx1P52946 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pdx1P52946 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Pdx1P52946 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdx1P52946 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdx1P52946 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdx1P52946 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pdx1P52946 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Pdx1P52946 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.17■□□□□ 0.5
Pdx1P52946 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.17■□□□□ 0.5
Pdx1P52946 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.17■□□□□ 0.5
Pdx1P52946 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdx1P52946 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Pdx1P52946 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdx1P52946 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdx1P52946 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdx1P52946 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdx1P52946 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Pdx1P52946 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Pdx1P52946 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pdx1P52946 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.16■□□□□ 0.5
Pdx1P52946 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pdx1P52946 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pdx1P52946 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pdx1P52946 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pdx1P52946 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pdx1P52946 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pdx1P52946 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pdx1P52946 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Pdx1P52946 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Pdx1P52946 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.15■□□□□ 0.5
Pdx1P52946 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pdx1P52946 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Pdx1P52946 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
Pdx1P52946 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pdx1P52946 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Pdx1P52946 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.15■□□□□ 0.5
Pdx1P52946 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pdx1P52946 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pdx1P52946 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pdx1P52946 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.15■□□□□ 0.5
Pdx1P52946 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pdx1P52946 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pdx1P52946 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pdx1P52946 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pdx1P52946 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pdx1P52946 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Pdx1P52946 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pdx1P52946 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pdx1P52946 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pdx1P52946 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pdx1P52946 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms