Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gli1P47806 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gli1P47806 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Gli1P47806 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gli1P47806 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Gli1P47806 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gli1P47806 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gli1P47806 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gli1P47806 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gli1P47806 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gli1P47806 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
Gli1P47806 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.91■□□□□ 0.46
Gli1P47806 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gli1P47806 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Gli1P47806 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.91■□□□□ 0.46
Gli1P47806 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Gli1P47806 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.91■□□□□ 0.46
Gli1P47806 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.91■□□□□ 0.46
Gli1P47806 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gli1P47806 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gli1P47806 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Gli1P47806 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Gli1P47806 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gli1P47806 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gli1P47806 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Gli1P47806 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gli1P47806 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gli1P47806 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gli1P47806 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gli1P47806 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Gli1P47806 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Gli1P47806 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.9■□□□□ 0.46
Gli1P47806 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gli1P47806 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gli1P47806 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Gli1P47806 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gli1P47806 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Gli1P47806 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gli1P47806 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Gli1P47806 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gli1P47806 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Gli1P47806 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.89■□□□□ 0.46
Gli1P47806 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Gli1P47806 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Gli1P47806 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Gli1P47806 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Gli1P47806 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Gli1P47806 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gli1P47806 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.89■□□□□ 0.45
Gli1P47806 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Gli1P47806 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.89■□□□□ 0.45
Gli1P47806 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Gli1P47806 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Gli1P47806 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.89■□□□□ 0.45
Gli1P47806 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gli1P47806 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Gli1P47806 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gli1P47806 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gli1P47806 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Gli1P47806 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gli1P47806 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gli1P47806 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.88■□□□□ 0.45
Gli1P47806 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.88■□□□□ 0.45
Gli1P47806 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Gli1P47806 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.88■□□□□ 0.45
Gli1P47806 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gli1P47806 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gli1P47806 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Gli1P47806 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Gli1P47806 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gli1P47806 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Gli1P47806 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gli1P47806 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Gli1P47806 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Gli1P47806 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Gli1P47806 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
Gli1P47806 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.87■□□□□ 0.45
Gli1P47806 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Gli1P47806 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.87■□□□□ 0.45
Gli1P47806 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gli1P47806 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gli1P47806 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Gli1P47806 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gli1P47806 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Gli1P47806 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
Gli1P47806 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Gli1P47806 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gli1P47806 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gli1P47806 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Gli1P47806 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Gli1P47806 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.86■□□□□ 0.45
Gli1P47806 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gli1P47806 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Gli1P47806 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Gli1P47806 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.86■□□□□ 0.45
Gli1P47806 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Gli1P47806 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Gli1P47806 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Gli1P47806 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.86■□□□□ 0.45
Gli1P47806 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms