Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdx2P43241 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdx2P43241 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.54■□□□□ 0.4
Cdx2P43241 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.54■□□□□ 0.4
Cdx2P43241 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Cdx2P43241 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdx2P43241 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Cdx2P43241 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdx2P43241 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdx2P43241 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.53■□□□□ 0.4
Cdx2P43241 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdx2P43241 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.53■□□□□ 0.4
Cdx2P43241 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cdx2P43241 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Cdx2P43241 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdx2P43241 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdx2P43241 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdx2P43241 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdx2P43241 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Cdx2P43241 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdx2P43241 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdx2P43241 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdx2P43241 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Cdx2P43241 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
Cdx2P43241 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cdx2P43241 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.52■□□□□ 0.4
Cdx2P43241 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Cdx2P43241 Gm37292-201ENSMUST00000192062 758 ntBASIC17.52■□□□□ 0.4
Cdx2P43241 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.52■□□□□ 0.4
Cdx2P43241 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdx2P43241 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdx2P43241 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Cdx2P43241 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cdx2P43241 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cdx2P43241 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdx2P43241 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdx2P43241 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cdx2P43241 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdx2P43241 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdx2P43241 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdx2P43241 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdx2P43241 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cdx2P43241 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cdx2P43241 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Cdx2P43241 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Cdx2P43241 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdx2P43241 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdx2P43241 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.5■□□□□ 0.39
Cdx2P43241 Gm38285-201ENSMUST00000192928 922 ntBASIC17.5■□□□□ 0.39
Cdx2P43241 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdx2P43241 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cdx2P43241 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cdx2P43241 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cdx2P43241 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdx2P43241 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cdx2P43241 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cdx2P43241 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cdx2P43241 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdx2P43241 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdx2P43241 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdx2P43241 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdx2P43241 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cdx2P43241 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.49■□□□□ 0.39
Cdx2P43241 Gm11539-201ENSMUST00000119837 557 ntBASIC17.49■□□□□ 0.39
Cdx2P43241 Gm13436-201ENSMUST00000120418 567 ntBASIC17.49■□□□□ 0.39
Cdx2P43241 Gm13559-201ENSMUST00000120476 863 ntBASIC17.49■□□□□ 0.39
Cdx2P43241 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cdx2P43241 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdx2P43241 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdx2P43241 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cdx2P43241 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Cdx2P43241 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Cdx2P43241 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdx2P43241 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.48■□□□□ 0.39
Cdx2P43241 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cdx2P43241 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdx2P43241 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdx2P43241 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdx2P43241 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cdx2P43241 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.48■□□□□ 0.39
Cdx2P43241 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cdx2P43241 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.48■□□□□ 0.39
Cdx2P43241 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.47■□□□□ 0.39
Cdx2P43241 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdx2P43241 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
Cdx2P43241 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Cdx2P43241 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.47■□□□□ 0.39
Cdx2P43241 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.47■□□□□ 0.39
Cdx2P43241 Timm23-208ENSMUST00000226683 750 ntBASIC17.47■□□□□ 0.39
Cdx2P43241 Odf3b-204ENSMUST00000227834 930 ntBASIC17.47■□□□□ 0.39
Cdx2P43241 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Cdx2P43241 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.47■□□□□ 0.39
Cdx2P43241 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdx2P43241 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdx2P43241 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdx2P43241 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.47■□□□□ 0.39
Cdx2P43241 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cdx2P43241 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cdx2P43241 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cdx2P43241 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms