Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nkx2-2P42586 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Nkx2-2P42586 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nkx2-2P42586 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.88■□□□□ 0.29
Nkx2-2P42586 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nkx2-2P42586 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nkx2-2P42586 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nkx2-2P42586 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nkx2-2P42586 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx2-2P42586 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx2-2P42586 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx2-2P42586 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC16.87■□□□□ 0.29
Nkx2-2P42586 Gm6211-202ENSMUST00000167849 925 ntBASIC16.87■□□□□ 0.29
Nkx2-2P42586 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC16.87■□□□□ 0.29
Nkx2-2P42586 Gm37179-201ENSMUST00000194862 823 ntBASIC16.87■□□□□ 0.29
Nkx2-2P42586 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.87■□□□□ 0.29
Nkx2-2P42586 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx2-2P42586 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx2-2P42586 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.87■□□□□ 0.29
Nkx2-2P42586 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.87■□□□□ 0.29
Nkx2-2P42586 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.87■□□□□ 0.29
Nkx2-2P42586 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Nkx2-2P42586 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx2-2P42586 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.86■□□□□ 0.29
Nkx2-2P42586 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx2-2P42586 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx2-2P42586 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx2-2P42586 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.86■□□□□ 0.29
Nkx2-2P42586 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx2-2P42586 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.86■□□□□ 0.29
Nkx2-2P42586 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx2-2P42586 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.86■□□□□ 0.29
Nkx2-2P42586 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC16.86■□□□□ 0.29
Nkx2-2P42586 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Nkx2-2P42586 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx2-2P42586 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
Nkx2-2P42586 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx2-2P42586 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx2-2P42586 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx2-2P42586 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx2-2P42586 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.86■□□□□ 0.29
Nkx2-2P42586 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.86■□□□□ 0.29
Nkx2-2P42586 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx2-2P42586 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx2-2P42586 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx2-2P42586 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx2-2P42586 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx2-2P42586 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx2-2P42586 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Nkx2-2P42586 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx2-2P42586 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx2-2P42586 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.85■□□□□ 0.29
Nkx2-2P42586 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC16.85■□□□□ 0.29
Nkx2-2P42586 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx2-2P42586 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx2-2P42586 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Nkx2-2P42586 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.85■□□□□ 0.29
Nkx2-2P42586 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx2-2P42586 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Nkx2-2P42586 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx2-2P42586 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx2-2P42586 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx2-2P42586 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx2-2P42586 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC16.84■□□□□ 0.29
Nkx2-2P42586 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx2-2P42586 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx2-2P42586 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx2-2P42586 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Nkx2-2P42586 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx2-2P42586 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.84■□□□□ 0.29
Nkx2-2P42586 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx2-2P42586 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Nkx2-2P42586 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.29
Nkx2-2P42586 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.83■□□□□ 0.28
Nkx2-2P42586 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx2-2P42586 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx2-2P42586 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.83■□□□□ 0.28
Nkx2-2P42586 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx2-2P42586 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx2-2P42586 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx2-2P42586 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx2-2P42586 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx2-2P42586 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx2-2P42586 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx2-2P42586 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx2-2P42586 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx2-2P42586 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx2-2P42586 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Nkx2-2P42586 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Nkx2-2P42586 Gm13148-201ENSMUST00000118892 745 ntBASIC16.82■□□□□ 0.28
Nkx2-2P42586 Gm12933-201ENSMUST00000120203 872 ntBASIC16.82■□□□□ 0.28
Nkx2-2P42586 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.82■□□□□ 0.28
Nkx2-2P42586 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx2-2P42586 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx2-2P42586 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx2-2P42586 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.82■□□□□ 0.28
Nkx2-2P42586 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx2-2P42586 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx2-2P42586 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx2-2P42586 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms