Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Gm6211-202ENSMUST00000167849 925 ntBASIC18.12■□□□□ 0.49
HmgclP38060 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.12■□□□□ 0.49
HmgclP38060 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
HmgclP38060 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
HmgclP38060 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
HmgclP38060 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.12■□□□□ 0.49
HmgclP38060 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HmgclP38060 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HmgclP38060 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HmgclP38060 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HmgclP38060 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
HmgclP38060 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
HmgclP38060 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HmgclP38060 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HmgclP38060 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
HmgclP38060 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
HmgclP38060 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
HmgclP38060 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
HmgclP38060 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HmgclP38060 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.11■□□□□ 0.49
HmgclP38060 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
HmgclP38060 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HmgclP38060 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HmgclP38060 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HmgclP38060 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HmgclP38060 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HmgclP38060 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HmgclP38060 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HmgclP38060 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HmgclP38060 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HmgclP38060 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
HmgclP38060 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HmgclP38060 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HmgclP38060 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
HmgclP38060 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HmgclP38060 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HmgclP38060 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.1■□□□□ 0.49
HmgclP38060 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HmgclP38060 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.1■□□□□ 0.49
HmgclP38060 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HmgclP38060 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HmgclP38060 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HmgclP38060 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
HmgclP38060 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HmgclP38060 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HmgclP38060 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.09■□□□□ 0.49
HmgclP38060 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.09■□□□□ 0.49
HmgclP38060 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.09■□□□□ 0.49
HmgclP38060 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HmgclP38060 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HmgclP38060 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.09■□□□□ 0.49
HmgclP38060 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HmgclP38060 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
HmgclP38060 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.09■□□□□ 0.49
HmgclP38060 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HmgclP38060 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.09■□□□□ 0.49
HmgclP38060 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.08■□□□□ 0.49
HmgclP38060 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HmgclP38060 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.08■□□□□ 0.49
HmgclP38060 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HmgclP38060 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.08■□□□□ 0.48
HmgclP38060 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
HmgclP38060 Gm12933-201ENSMUST00000120203 872 ntBASIC18.08■□□□□ 0.48
HmgclP38060 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.08■□□□□ 0.48
HmgclP38060 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HmgclP38060 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HmgclP38060 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HmgclP38060 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HmgclP38060 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HmgclP38060 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HmgclP38060 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HmgclP38060 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
HmgclP38060 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
HmgclP38060 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HmgclP38060 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
HmgclP38060 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HmgclP38060 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
HmgclP38060 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.07■□□□□ 0.48
HmgclP38060 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.07■□□□□ 0.48
HmgclP38060 Mir5133-201ENSMUST00000174955 77 ntBASIC18.07■□□□□ 0.48
HmgclP38060 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HmgclP38060 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.07■□□□□ 0.48
HmgclP38060 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
HmgclP38060 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HmgclP38060 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HmgclP38060 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HmgclP38060 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HmgclP38060 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HmgclP38060 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HmgclP38060 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.06■□□□□ 0.48
HmgclP38060 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HmgclP38060 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
HmgclP38060 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HmgclP38060 Gm13148-201ENSMUST00000118892 745 ntBASIC18.06■□□□□ 0.48
HmgclP38060 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HmgclP38060 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.06■□□□□ 0.48
HmgclP38060 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HmgclP38060 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.06■□□□□ 0.48
HmgclP38060 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HmgclP38060 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms