Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rfc1P35601 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rfc1P35601 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rfc1P35601 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rfc1P35601 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rfc1P35601 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rfc1P35601 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rfc1P35601 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Rfc1P35601 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.36■□□□□ 0.69
Rfc1P35601 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.36■□□□□ 0.69
Rfc1P35601 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.36■□□□□ 0.69
Rfc1P35601 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rfc1P35601 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rfc1P35601 Gm43294-201ENSMUST00000202850 2490 ntBASIC19.36■□□□□ 0.69
Rfc1P35601 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rfc1P35601 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rfc1P35601 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rfc1P35601 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rfc1P35601 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rfc1P35601 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rfc1P35601 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rfc1P35601 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rfc1P35601 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Rfc1P35601 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rfc1P35601 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rfc1P35601 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rfc1P35601 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.35■□□□□ 0.69
Rfc1P35601 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.35■□□□□ 0.69
Rfc1P35601 Zcchc6-207ENSMUST00000225576 2499 ntBASIC19.35■□□□□ 0.69
Rfc1P35601 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rfc1P35601 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rfc1P35601 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC19.35■□□□□ 0.69
Rfc1P35601 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rfc1P35601 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rfc1P35601 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.34■□□□□ 0.69
Rfc1P35601 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rfc1P35601 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rfc1P35601 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rfc1P35601 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rfc1P35601 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rfc1P35601 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rfc1P35601 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rfc1P35601 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rfc1P35601 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.34■□□□□ 0.69
Rfc1P35601 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Rfc1P35601 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Rfc1P35601 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rfc1P35601 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rfc1P35601 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rfc1P35601 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rfc1P35601 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rfc1P35601 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rfc1P35601 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rfc1P35601 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rfc1P35601 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Rfc1P35601 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rfc1P35601 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rfc1P35601 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rfc1P35601 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rfc1P35601 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rfc1P35601 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
Rfc1P35601 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rfc1P35601 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rfc1P35601 Gm15743-202ENSMUST00000182690 1901 ntBASIC19.32■□□□□ 0.68
Rfc1P35601 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rfc1P35601 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rfc1P35601 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rfc1P35601 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rfc1P35601 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rfc1P35601 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rfc1P35601 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rfc1P35601 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC19.32■□□□□ 0.68
Rfc1P35601 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Rfc1P35601 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rfc1P35601 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Rfc1P35601 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rfc1P35601 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rfc1P35601 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rfc1P35601 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rfc1P35601 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Rfc1P35601 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rfc1P35601 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Rfc1P35601 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rfc1P35601 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rfc1P35601 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.31■□□□□ 0.68
Rfc1P35601 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rfc1P35601 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rfc1P35601 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rfc1P35601 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rfc1P35601 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rfc1P35601 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rfc1P35601 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rfc1P35601 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.3■□□□□ 0.68
Rfc1P35601 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
Rfc1P35601 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Rfc1P35601 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.3■□□□□ 0.68
Rfc1P35601 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rfc1P35601 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rfc1P35601 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rfc1P35601 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms