Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Mmp3P28862 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Mmp3P28862 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.75■□□□□ 0.75
Mmp3P28862 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Mmp3P28862 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Mmp3P28862 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Mmp3P28862 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.75■□□□□ 0.75
Mmp3P28862 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Mmp3P28862 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Mmp3P28862 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Mmp3P28862 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Mmp3P28862 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Mmp3P28862 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Mmp3P28862 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Mmp3P28862 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Mmp3P28862 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Mmp3P28862 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Mmp3P28862 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Mmp3P28862 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Mmp3P28862 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.73■□□□□ 0.75
Mmp3P28862 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.73■□□□□ 0.75
Mmp3P28862 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Mmp3P28862 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Mmp3P28862 Mir7071-201ENSMUST00000184847 69 ntBASIC19.73■□□□□ 0.75
Mmp3P28862 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.73■□□□□ 0.75
Mmp3P28862 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.73■□□□□ 0.75
Mmp3P28862 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Mmp3P28862 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Mmp3P28862 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Mmp3P28862 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Mmp3P28862 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Mmp3P28862 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mmp3P28862 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mmp3P28862 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mmp3P28862 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Mmp3P28862 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Mmp3P28862 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.72■□□□□ 0.75
Mmp3P28862 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mmp3P28862 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mmp3P28862 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mmp3P28862 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mmp3P28862 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mmp3P28862 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Mmp3P28862 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Mmp3P28862 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Mmp3P28862 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Mmp3P28862 Gm715-201ENSMUST00000117865 831 ntBASIC19.71■□□□□ 0.75
Mmp3P28862 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC19.71■□□□□ 0.75
Mmp3P28862 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Mmp3P28862 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Mmp3P28862 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.71■□□□□ 0.75
Mmp3P28862 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Mmp3P28862 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Mmp3P28862 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.71■□□□□ 0.75
Mmp3P28862 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Mmp3P28862 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Mmp3P28862 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Mmp3P28862 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Mmp3P28862 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.7■□□□□ 0.74
Mmp3P28862 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Mmp3P28862 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Mmp3P28862 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Mmp3P28862 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Mmp3P28862 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.7■□□□□ 0.74
Mmp3P28862 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Mmp3P28862 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Mmp3P28862 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Mmp3P28862 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Mmp3P28862 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.7■□□□□ 0.74
Mmp3P28862 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Mmp3P28862 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Mmp3P28862 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Mmp3P28862 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Mmp3P28862 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Mmp3P28862 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Mmp3P28862 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Mmp3P28862 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Mmp3P28862 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC19.69■□□□□ 0.74
Mmp3P28862 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC19.69■□□□□ 0.74
Mmp3P28862 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.69■□□□□ 0.74
Mmp3P28862 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.69■□□□□ 0.74
Mmp3P28862 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.69■□□□□ 0.74
Mmp3P28862 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.69■□□□□ 0.74
Mmp3P28862 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Mmp3P28862 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Mmp3P28862 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Mmp3P28862 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Mmp3P28862 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Mmp3P28862 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Mmp3P28862 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Mmp3P28862 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Mmp3P28862 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.68■□□□□ 0.74
Mmp3P28862 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Mmp3P28862 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Mmp3P28862 Mir1199-201ENSMUST00000117015 119 ntBASIC19.68■□□□□ 0.74
Mmp3P28862 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Mmp3P28862 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.68■□□□□ 0.74
Mmp3P28862 Gm38285-201ENSMUST00000192928 922 ntBASIC19.68■□□□□ 0.74
Mmp3P28862 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Mmp3P28862 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms