Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pde6bP23440 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pde6bP23440 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pde6bP23440 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pde6bP23440 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.97■□□□□ 0.79
Pde6bP23440 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
Pde6bP23440 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pde6bP23440 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pde6bP23440 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Pde6bP23440 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pde6bP23440 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pde6bP23440 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pde6bP23440 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pde6bP23440 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Pde6bP23440 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Pde6bP23440 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Pde6bP23440 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pde6bP23440 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pde6bP23440 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pde6bP23440 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pde6bP23440 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pde6bP23440 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pde6bP23440 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Pde6bP23440 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pde6bP23440 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pde6bP23440 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Pde6bP23440 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.95■□□□□ 0.78
Pde6bP23440 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
Pde6bP23440 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pde6bP23440 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.95■□□□□ 0.78
Pde6bP23440 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pde6bP23440 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pde6bP23440 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pde6bP23440 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Pde6bP23440 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Pde6bP23440 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Pde6bP23440 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pde6bP23440 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pde6bP23440 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Pde6bP23440 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pde6bP23440 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pde6bP23440 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pde6bP23440 Gm15378-201ENSMUST00000121894 207 ntBASIC19.94■□□□□ 0.78
Pde6bP23440 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.94■□□□□ 0.78
Pde6bP23440 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pde6bP23440 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pde6bP23440 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pde6bP23440 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pde6bP23440 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.94■□□□□ 0.78
Pde6bP23440 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pde6bP23440 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Pde6bP23440 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Pde6bP23440 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pde6bP23440 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Pde6bP23440 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pde6bP23440 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Pde6bP23440 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pde6bP23440 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Pde6bP23440 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Pde6bP23440 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Pde6bP23440 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pde6bP23440 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.93■□□□□ 0.78
Pde6bP23440 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Pde6bP23440 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pde6bP23440 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pde6bP23440 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pde6bP23440 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pde6bP23440 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.92■□□□□ 0.78
Pde6bP23440 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Pde6bP23440 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Pde6bP23440 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC19.92■□□□□ 0.78
Pde6bP23440 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Pde6bP23440 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.92■□□□□ 0.78
Pde6bP23440 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pde6bP23440 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.92■□□□□ 0.78
Pde6bP23440 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pde6bP23440 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pde6bP23440 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pde6bP23440 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pde6bP23440 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Pde6bP23440 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pde6bP23440 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pde6bP23440 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pde6bP23440 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pde6bP23440 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
Pde6bP23440 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Pde6bP23440 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.91■□□□□ 0.78
Pde6bP23440 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pde6bP23440 Gm13158-201ENSMUST00000122007 736 ntBASIC19.91■□□□□ 0.78
Pde6bP23440 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Pde6bP23440 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pde6bP23440 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.91■□□□□ 0.78
Pde6bP23440 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC19.91■□□□□ 0.78
Pde6bP23440 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pde6bP23440 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Pde6bP23440 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Pde6bP23440 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pde6bP23440 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Pde6bP23440 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Pde6bP23440 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms