Protein–RNA interactions for Protein: P14576

Srp54, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54P14576 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.04■□□□□ 0.48
Srp54P14576 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Srp54P14576 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Srp54P14576 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
Srp54P14576 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Srp54P14576 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.03■□□□□ 0.48
Srp54P14576 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Srp54P14576 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Srp54P14576 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.03■□□□□ 0.48
Srp54P14576 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Srp54P14576 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
Srp54P14576 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Srp54P14576 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Srp54P14576 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Srp54P14576 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Srp54P14576 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Srp54P14576 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Srp54P14576 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Srp54P14576 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Srp54P14576 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Srp54P14576 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Srp54P14576 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Srp54P14576 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.02■□□□□ 0.48
Srp54P14576 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.02■□□□□ 0.48
Srp54P14576 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Srp54P14576 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Srp54P14576 Dio3-201ENSMUST00000097228 1449 ntBASIC18.02■□□□□ 0.48
Srp54P14576 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Srp54P14576 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Srp54P14576 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Srp54P14576 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Srp54P14576 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Srp54P14576 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
Srp54P14576 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Srp54P14576 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.01■□□□□ 0.47
Srp54P14576 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Srp54P14576 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Srp54P14576 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Srp54P14576 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.01■□□□□ 0.47
Srp54P14576 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Srp54P14576 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Srp54P14576 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Srp54P14576 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Srp54P14576 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18■□□□□ 0.47
Srp54P14576 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18■□□□□ 0.47
Srp54P14576 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18■□□□□ 0.47
Srp54P14576 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Srp54P14576 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Srp54P14576 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Srp54P14576 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18■□□□□ 0.47
Srp54P14576 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Srp54P14576 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18■□□□□ 0.47
Srp54P14576 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18■□□□□ 0.47
Srp54P14576 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Srp54P14576 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18■□□□□ 0.47
Srp54P14576 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18■□□□□ 0.47
Srp54P14576 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Srp54P14576 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Srp54P14576 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Srp54P14576 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Srp54P14576 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Srp54P14576 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Srp54P14576 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Srp54P14576 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Srp54P14576 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Srp54P14576 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.99■□□□□ 0.47
Srp54P14576 Gm10812-201ENSMUST00000099864 546 ntBASIC17.99■□□□□ 0.47
Srp54P14576 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.99■□□□□ 0.47
Srp54P14576 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Srp54P14576 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Srp54P14576 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Srp54P14576 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Srp54P14576 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Srp54P14576 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Srp54P14576 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.98■□□□□ 0.47
Srp54P14576 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Srp54P14576 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.98■□□□□ 0.47
Srp54P14576 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Srp54P14576 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Srp54P14576 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Srp54P14576 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Srp54P14576 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Srp54P14576 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Srp54P14576 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Srp54P14576 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.98■□□□□ 0.47
Srp54P14576 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Srp54P14576 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Srp54P14576 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Srp54P14576 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.97■□□□□ 0.47
Srp54P14576 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Srp54P14576 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.97■□□□□ 0.47
Srp54P14576 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Srp54P14576 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Srp54P14576 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Srp54P14576 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Srp54P14576 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Srp54P14576 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Srp54P14576 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.97■□□□□ 0.47
Srp54P14576 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Srp54P14576 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms