Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.32■□□□□ 0.2
Ccl3P10855 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.32■□□□□ 0.2
Ccl3P10855 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.32■□□□□ 0.2
Ccl3P10855 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccl3P10855 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ccl3P10855 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccl3P10855 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccl3P10855 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccl3P10855 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ccl3P10855 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccl3P10855 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.31■□□□□ 0.2
Ccl3P10855 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.31■□□□□ 0.2
Ccl3P10855 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ccl3P10855 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.31■□□□□ 0.2
Ccl3P10855 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccl3P10855 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ccl3P10855 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Ccl3P10855 Gm20634-201ENSMUST00000090779 2956 ntBASIC16.31■□□□□ 0.2
Ccl3P10855 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Ccl3P10855 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccl3P10855 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccl3P10855 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccl3P10855 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccl3P10855 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccl3P10855 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ccl3P10855 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ccl3P10855 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Ccl3P10855 Gm38285-201ENSMUST00000192928 922 ntBASIC16.3■□□□□ 0.2
Ccl3P10855 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ccl3P10855 Gm30025-201ENSMUST00000218555 728 ntBASIC16.3■□□□□ 0.2
Ccl3P10855 Gm38160-201ENSMUST00000193090 2499 ntBASIC16.3■□□□□ 0.2
Ccl3P10855 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccl3P10855 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccl3P10855 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccl3P10855 Gm6277-202ENSMUST00000224036 2779 ntBASIC16.29■□□□□ 0.2
Ccl3P10855 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccl3P10855 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccl3P10855 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccl3P10855 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Ccl3P10855 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.29■□□□□ 0.2
Ccl3P10855 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccl3P10855 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Ccl3P10855 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccl3P10855 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccl3P10855 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccl3P10855 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccl3P10855 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccl3P10855 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccl3P10855 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccl3P10855 Golph3-202ENSMUST00000226517 2359 ntBASIC16.28■□□□□ 0.2
Ccl3P10855 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccl3P10855 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Ccl3P10855 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccl3P10855 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccl3P10855 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccl3P10855 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.28■□□□□ 0.2
Ccl3P10855 Gm37292-201ENSMUST00000192062 758 ntBASIC16.28■□□□□ 0.2
Ccl3P10855 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ccl3P10855 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.28■□□□□ 0.2
Ccl3P10855 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.28■□□□□ 0.2
Ccl3P10855 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Ccl3P10855 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.28■□□□□ 0.2
Ccl3P10855 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccl3P10855 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccl3P10855 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccl3P10855 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
Ccl3P10855 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccl3P10855 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccl3P10855 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
Ccl3P10855 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccl3P10855 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.27■□□□□ 0.2
Ccl3P10855 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccl3P10855 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ccl3P10855 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccl3P10855 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Ccl3P10855 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccl3P10855 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.27■□□□□ 0.19
Ccl3P10855 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccl3P10855 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccl3P10855 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccl3P10855 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ccl3P10855 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccl3P10855 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC16.26■□□□□ 0.19
Ccl3P10855 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccl3P10855 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccl3P10855 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Ccl3P10855 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccl3P10855 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccl3P10855 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccl3P10855 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.26■□□□□ 0.19
Ccl3P10855 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ccl3P10855 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccl3P10855 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccl3P10855 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ccl3P10855 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccl3P10855 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccl3P10855 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.25■□□□□ 0.19
Ccl3P10855 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccl3P10855 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ccl3P10855 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms