Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Ccl1P10146 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC14.32□□□□□ -0.12
Ccl1P10146 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccl1P10146 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ccl1P10146 Gm42911-201ENSMUST00000199360 1630 ntBASIC14.32□□□□□ -0.12
Ccl1P10146 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccl1P10146 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ccl1P10146 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC14.32□□□□□ -0.12
Ccl1P10146 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Ccl1P10146 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ccl1P10146 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccl1P10146 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccl1P10146 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Ccl1P10146 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccl1P10146 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccl1P10146 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC14.31□□□□□ -0.12
Ccl1P10146 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccl1P10146 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccl1P10146 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccl1P10146 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccl1P10146 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccl1P10146 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC14.31□□□□□ -0.12
Ccl1P10146 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC14.31□□□□□ -0.12
Ccl1P10146 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC14.31□□□□□ -0.12
Ccl1P10146 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccl1P10146 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Ccl1P10146 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccl1P10146 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Ccl1P10146 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccl1P10146 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccl1P10146 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccl1P10146 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Ccl1P10146 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
Ccl1P10146 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC14.31□□□□□ -0.12
Ccl1P10146 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.31□□□□□ -0.12
Ccl1P10146 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccl1P10146 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccl1P10146 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccl1P10146 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccl1P10146 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccl1P10146 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccl1P10146 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccl1P10146 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccl1P10146 Mir6538-201ENSMUST00000183713 110 ntBASIC14.3□□□□□ -0.12
Ccl1P10146 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC14.3□□□□□ -0.12
Ccl1P10146 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccl1P10146 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
Ccl1P10146 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccl1P10146 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccl1P10146 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccl1P10146 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccl1P10146 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccl1P10146 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccl1P10146 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccl1P10146 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccl1P10146 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccl1P10146 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Ccl1P10146 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccl1P10146 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccl1P10146 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC14.29□□□□□ -0.12
Ccl1P10146 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ccl1P10146 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccl1P10146 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccl1P10146 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccl1P10146 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccl1P10146 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccl1P10146 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccl1P10146 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccl1P10146 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccl1P10146 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccl1P10146 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccl1P10146 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccl1P10146 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccl1P10146 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccl1P10146 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccl1P10146 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ccl1P10146 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccl1P10146 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccl1P10146 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC14.28□□□□□ -0.12
Ccl1P10146 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ccl1P10146 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccl1P10146 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccl1P10146 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ccl1P10146 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccl1P10146 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccl1P10146 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccl1P10146 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccl1P10146 Gm5828-201ENSMUST00000071842 1860 ntBASIC14.28□□□□□ -0.12
Ccl1P10146 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccl1P10146 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccl1P10146 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccl1P10146 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ccl1P10146 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccl1P10146 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccl1P10146 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccl1P10146 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Ccl1P10146 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.27□□□□□ -0.12
Ccl1P10146 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccl1P10146 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccl1P10146 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms