Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col4a2P08122 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a2P08122 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Col4a2P08122 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a2P08122 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a2P08122 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a2P08122 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a2P08122 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a2P08122 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Col4a2P08122 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col4a2P08122 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Col4a2P08122 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Col4a2P08122 Gm3375-201ENSMUST00000203929 796 ntBASIC17.27■□□□□ 0.36
Col4a2P08122 Zfp783-201ENSMUST00000095946 670 ntBASIC17.27■□□□□ 0.36
Col4a2P08122 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Col4a2P08122 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col4a2P08122 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.27■□□□□ 0.36
Col4a2P08122 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col4a2P08122 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col4a2P08122 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.27■□□□□ 0.36
Col4a2P08122 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col4a2P08122 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col4a2P08122 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Col4a2P08122 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Col4a2P08122 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Col4a2P08122 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Col4a2P08122 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Col4a2P08122 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Col4a2P08122 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.27■□□□□ 0.35
Col4a2P08122 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Col4a2P08122 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Col4a2P08122 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Col4a2P08122 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col4a2P08122 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col4a2P08122 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col4a2P08122 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col4a2P08122 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Col4a2P08122 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.26■□□□□ 0.35
Col4a2P08122 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col4a2P08122 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Col4a2P08122 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col4a2P08122 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col4a2P08122 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col4a2P08122 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col4a2P08122 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.25■□□□□ 0.35
Col4a2P08122 Gm18025-201ENSMUST00000221733 862 ntBASIC17.25■□□□□ 0.35
Col4a2P08122 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.25■□□□□ 0.35
Col4a2P08122 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col4a2P08122 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Col4a2P08122 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col4a2P08122 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Col4a2P08122 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col4a2P08122 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col4a2P08122 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col4a2P08122 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col4a2P08122 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.24■□□□□ 0.35
Col4a2P08122 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.24■□□□□ 0.35
Col4a2P08122 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col4a2P08122 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Col4a2P08122 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.24■□□□□ 0.35
Col4a2P08122 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Col4a2P08122 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Col4a2P08122 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.24■□□□□ 0.35
Col4a2P08122 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Col4a2P08122 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col4a2P08122 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col4a2P08122 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Col4a2P08122 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col4a2P08122 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Col4a2P08122 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col4a2P08122 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col4a2P08122 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Col4a2P08122 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Col4a2P08122 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col4a2P08122 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col4a2P08122 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col4a2P08122 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col4a2P08122 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Col4a2P08122 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col4a2P08122 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Col4a2P08122 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col4a2P08122 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col4a2P08122 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Col4a2P08122 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Col4a2P08122 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col4a2P08122 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col4a2P08122 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col4a2P08122 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
Col4a2P08122 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.22■□□□□ 0.35
Col4a2P08122 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Col4a2P08122 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col4a2P08122 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col4a2P08122 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col4a2P08122 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.21■□□□□ 0.35
Col4a2P08122 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Col4a2P08122 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col4a2P08122 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col4a2P08122 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Col4a2P08122 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.21■□□□□ 0.35
Col4a2P08122 Gm10819-201ENSMUST00000099988 561 ntBASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms