Protein–RNA interactions for Protein: P06328

Ig heavy chain V region VH558 B4, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06328 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P06328 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
P06328 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC13.48□□□□□ -0.25
P06328 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC13.48□□□□□ -0.25
P06328 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P06328 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P06328 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
P06328 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
P06328 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P06328 Gm14281-201ENSMUST00000121700 1294 ntBASIC13.48□□□□□ -0.25
P06328 Gm43017-201ENSMUST00000198296 752 ntBASIC13.48□□□□□ -0.25
P06328 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
P06328 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P06328 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P06328 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC13.48□□□□□ -0.25
P06328 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P06328 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P06328 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
P06328 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P06328 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
P06328 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P06328 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC13.47□□□□□ -0.25
P06328 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
P06328 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
P06328 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC13.47□□□□□ -0.25
P06328 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
P06328 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC13.47□□□□□ -0.25
P06328 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
P06328 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
P06328 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
P06328 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
P06328 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
P06328 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
P06328 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
P06328 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
P06328 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
P06328 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC13.47□□□□□ -0.25
P06328 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
P06328 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
P06328 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
P06328 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
P06328 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
P06328 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC13.47□□□□□ -0.25
P06328 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
P06328 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC13.47□□□□□ -0.25
P06328 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
P06328 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
P06328 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
P06328 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
P06328 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
P06328 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
P06328 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
P06328 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
P06328 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
P06328 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
P06328 Cdc34b-202ENSMUST00000188741 1252 ntBASIC13.46□□□□□ -0.25
P06328 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
P06328 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
P06328 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
P06328 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
P06328 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
P06328 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC13.46□□□□□ -0.26
P06328 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
P06328 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
P06328 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
P06328 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
P06328 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
P06328 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.26
P06328 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
P06328 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
P06328 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
P06328 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
P06328 Gm44832-201ENSMUST00000208849 2303 ntBASIC13.45□□□□□ -0.26
P06328 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
P06328 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
P06328 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC13.45□□□□□ -0.26
P06328 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC13.45□□□□□ -0.26
P06328 Gm19094-201ENSMUST00000209791 1246 ntBASIC13.45□□□□□ -0.26
P06328 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
P06328 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
P06328 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
P06328 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
P06328 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
P06328 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
P06328 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
P06328 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC13.44□□□□□ -0.26
P06328 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
P06328 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
P06328 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
P06328 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
P06328 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
P06328 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
P06328 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
P06328 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
P06328 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
P06328 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
P06328 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
P06328 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
P06328 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
P06328 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms